Gene detail information of Glyur000476s00022382 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01990.1 | 4.00E-27 | |
| NR | XP_003538379.2 | 7.91E-109 | PREDICTED: uncharacterized protein LOC100797065 [Glycine max] |
| Swissprot | tr|Q6NLW5|XRI1_ARATH | 2.00E-12 | Protein XRI1 |
| trEMBL | tr|I1LM85|I1LM85_SOYBN | 1.00E-109 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G33300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00476 | 129467 | 130856 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 110.698 |
| SRR1783600 | control | 112.800 |
| SRR1783602 | moderate drought stress | 93.875 |
| SRR1811619 | moderate drought stress | 92.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 47.972 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 47.409 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.298 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.074 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 57.675 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 57.525 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.488 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 58.392 |
| SRR2868004 | Drought Stress (root) | 57.727 |
| SRR2967015 | Control (root) | 61.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.198 |
| SRR9715740 | Leaf | 2.167 |
| SRR9715741 | Leaf | 1.098 |
| SRR9715739 | Root | 18.298 |
| SRR9715742 | Root | 25.876 |
| SRR9715743 | Root | 22.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 51.937 |
| SRR8749028 | MeJA induced 9h | 113.051 |
| SRR8749029 | MeJA induced 9h | 46.463 |
| SRR8749030 | Uninduced | 93.869 |
| SRR8749031 | Uninduced | 16.548 |
| SRR8749032 | Uninduced | 17.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 212.749 |
| SRR8400027 | Control - Root | 199.913 |