Gene detail information of Glyur000476s00022376 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16550.1 | 1.00E-43 | |
| NR | KHN08787.1 | 3.25E-122 | hypothetical protein glysoja_032202 [Glycine soja] |
| trEMBL | tr|I1LM95|I1LM95_SOYBN | 2.00E-119 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G33370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00476 | 48777 | 53164 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.321 |
| SRR1783600 | control | 42.163 |
| SRR1783602 | moderate drought stress | 53.720 |
| SRR1811619 | moderate drought stress | 53.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.826 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 41.104 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 111.872 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 135.809 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.447 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.563 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.532 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 44.115 |
| SRR2868004 | Drought Stress (root) | 54.716 |
| SRR2967015 | Control (root) | 38.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.522 |
| SRR9715740 | Leaf | 44.693 |
| SRR9715741 | Leaf | 40.016 |
| SRR9715739 | Root | 87.500 |
| SRR9715742 | Root | 63.236 |
| SRR9715743 | Root | 70.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.938 |
| SRR8749028 | MeJA induced 9h | 19.102 |
| SRR8749029 | MeJA induced 9h | 9.387 |
| SRR8749030 | Uninduced | 5.532 |
| SRR8749031 | Uninduced | 1.932 |
| SRR8749032 | Uninduced | 5.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 61.113 |
| SRR8400027 | Control - Root | 52.028 |