Gene detail

Gene detail information of Glyur000474s00038877.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G47750.1	0	D6 protein kinase like 2
NR	XP_006604033.1	0	PREDICTED: protein kinase PVPK-1-like isoform X1 [Glycine max]
COG	YP_004178129.1	3.00E-21	serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Swissprot	tr\|P15792\|KPK1_PHAVU	0	Protein kinase PVPK-1
trEMBL	tr\|K7MWU9\|K7MWU9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G10160.3}

Sequence

Transcript Sequence

>Glyur000474s00038877.1
TTAACATGAAAAAAAGCATTAAACTTTGCGAAAGCAAGAACATGAAACTCGGCGAGGTTGGATTTTTTAAGAGGGAACATAGCCATTAATTATTAATTATTTAATTAAGATAAGGAACTGCACTTTTTTANTCTTTTTATTCGCTTTGCTTGTGAAGTTGGCTTCGTTTTTTGCAATTCCCATTCCACAAAGCCAAACCCTGCATCCCCCCAAAAACTAACACAAAAGGAATGGATAAAAAAAAGCCAAAAATTAAAACAACATATTATTATTATTAATTAATATTAATATTGTTGTTGTTATAGTTTTTATTTGTGTTGTCCCTTCTTTTTCGATCGGATCTGGGAGCTCTTCAGAGTTGCAGAAAGCCACACCAAAGCAGCTTCACTTTCTGGGAGTGTGTGGTTTTTTTCTTCTCTTCTTGTTCCATAGTAGTCATGGAAGAAGGTTCTTTGCTTTGAAATTGCATTGCCATTTCTCTCCATTGATCAGCTTATTAAGAATCTCTTGATGGAGTCACCTGTTGATGGAGTTGAGTCTTCATCAGAGGTTCAGAATTCAATTTCTGGCATAGATCACAATCCTCCTTCGACATCTGGGATTCTGCGGCCTCCGTTAAGAGCATCTAGAAATCATGGACCTTCTTCCAATCACCTTAATCATGAGGCTAACAGTGTGAAGCAAGAAGGATCAACAAACATGGAGAAGCAATACTATATGCCNAATGGTAAATCTGACCATGTGATCCTTGCTACTAAAACTGCTGAAAGGTGTAACGGTNACAATGTCTCCGCAATCGAAACAAAATCGTGCATCGATCGACCGAATGAAGATTCCAAGAATGGTGATTCTAGTGGAACTTTAGAATCTGACAATTGCATATTAGGTTCATCAAAAGGAGTTGTTGATCAAACAAAGAGTTACTGTCACTCAGAGATTACTTTATGTGACACTGTCTATTCAGAAGCCAAGGAAAGTTTCGCCAATACTGGTGCCAGTGAATGTGTTAGTGTTGATAAGTCAGTTGAAAGCAGAGAAGTTAGTAACTCATGTGAATTTAATGAGAGCAGGAAGACCAGCATCTGTAGAGGGAGTACTGGGAGTGATGTTAGTGATGAGAGCAGCACCAGTAGTTTGAGCAGTGCTTTGTATAAACCCCACAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCTATCCGGGTGCGCGACGGGGGATTGGAAATGAGGCATTTCAGGTTGTTGAAGAAGTTGGGATGTGGAGACATTGGAAGTGTGTATCTAGCAGAGTTAAGTGGCACAAGGACTTGTTTTGCCATGAAGGTAATGAACAAAACAGAACTGGGAAGCCGCAAGAAGCTCCCGAGGGCTCAGACGGAGAGAGAGATATTGCAGTCTCTAGATCATCCATTTCTACCATCATTGTATACACACTTTGAGACAGAGACATTCTCATGCTTGGTAATGGAGTTTTGCCCTGGTGGGGATCTTCATGCACTCNGGCAAAGACAACCTGGGAAGTATTTTTCAGAGCATGCTGCCAGGTTTTACGTGGCAGAAGTTCTCCTGGCTTTGGAGTACTTGCACATGCTTGGGATCATCTACAGAGACCTCAAACCCGAGAACGTGTTGGTGAGAGAAGACGGTCACATAATGCTATCGGATTTCGATCTCTCTCTAAGGTGTGCTGTCAGTCCAACTCTGGTAAAATCATCAAACTCCAACTTGGAGACAAAAAGCTCAGGNTACTGCATTCAGCCTGCTTGCATTGAGCCGACATGTGTAGTGAAGCCAGACTGCATCCAACCTTCATGCTTCACGCCGCGTTTTCTATCCGGCAAATCCAAGAAAGAAAAGAAGCCAAAGCCACCAAAGAATGATGTGCACAATCAGGTGACCCCTCTCCCCGAGCTCATCGCCGAGCCCACAAATGCCCGGTCGATGTCCTTCGTGGGGACACACGANTACTTGGCNCCCGAGATCATCAAAGGGGAAGGGCATGGCAGTGCTGTTGACTGGTGGACATTTGGGATATTCTTATATGAGCTCTTGTTTGGTAGGACACCATTCAAAGGCTCGGCGAATCGAGCAACTCTATTCAATGTAGTTGGCCAGCCCTTGAGGTTTCCGGAATCCCCTACGGTCAGCTTTGCTGCCAGGGACTTGATCAGGGGCCTACTTGTGAAAGAGCCTCAGCATCGTCTCGCCTATAGACGCGGAGCCACGGAGATAAAGCAACATCCGTTCTTTCATAATGTTAACTGGGCTCTGATCCGCTGTGCGAGTCCTCCGGAGGTGCCAAGACAACAGGCCATGAAAGCACTCACAGCTGAGAAGGTGCCTGGGGTGAAGCCTTCTGGTAACTATTTGGATATTGATTTCTTTTGATCCTAATTAATGCCTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00474	56165	60558	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.6

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000474s00038877.1	PF00069.20	Pkinase	242	398	2.50E-37
Glyur000474s00038877.1	PF00069.20	Pkinase	473	580	5.50E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.808
SRR1783600	control	9.895
SRR1783602	moderate drought stress	10.603
SRR1811619	moderate drought stress	10.522

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.582
DRR006520	Root Summer glycyrrhizin high producing strain	11.503
DRR006521	Root Winter glycyrrhizin high producing strain	8.871
DRR006522	Root Winter glycyrrhizin high producing strain	8.696
DRR006523	Root Summer glycyrrhizin low producing strain	13.520
DRR006524	Root Summer glycyrrhizin low producing strain	13.251
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.971
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.050

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.036
SRR2868004	Drought Stress (root)	21.050
SRR2967015	Control (root)	29.079

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.697
SRR9715740	Leaf	5.602
SRR9715741	Leaf	8.077
SRR9715739	Root	5.669
SRR9715742	Root	9.194
SRR9715743	Root	9.284

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.350
SRR8749028	MeJA induced 9h	18.710
SRR8749029	MeJA induced 9h	15.063
SRR8749030	Uninduced	10.233
SRR8749031	Uninduced	13.770
SRR8749032	Uninduced	8.838

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.237
SRR8400027	Control - Root	16.734