Gene detail information of Glyur000473s00018941 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G40270.1 | 0 | HD domain-containing metal-dependent phosphohydrolase family protein |
| NR | KEH24851.1 | 0 | metal-dependent phosphohydrolase [Medicago truncatula] |
| COG | NP_579558.1 | 3.00E-38 | nucleotidyltransferase [Pyrococcus furiosus DSM 3638] |
| trEMBL | tr|A0A072U697|A0A072U697_MEDTR | 0 | Metal-dependent phosphohydrolase {ECO:0000313|EMBL:KEH24851.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00473 | 49383 | 56263 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000473s00018941.1 | PF01966.17 | HD | 75 | 215 | 5.00E-13 |
| Glyur000473s00018941.2 | PF01966.17 | HD | 75 | 215 | 3.50E-13 |
| Glyur000473s00018941.3 | PF01966.17 | HD | 75 | 215 | 3.30E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.721 |
| SRR1783600 | control | 16.844 |
| SRR1783602 | moderate drought stress | 21.223 |
| SRR1811619 | moderate drought stress | 21.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.159 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.567 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.526 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.201 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.559 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.150 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.766 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.020 |
| SRR2868004 | Drought Stress (root) | 23.180 |
| SRR2967015 | Control (root) | 30.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.033 |
| SRR9715740 | Leaf | 10.779 |
| SRR9715741 | Leaf | 25.202 |
| SRR9715739 | Root | 6.968 |
| SRR9715742 | Root | 21.149 |
| SRR9715743 | Root | 17.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.252 |
| SRR8749028 | MeJA induced 9h | 14.391 |
| SRR8749029 | MeJA induced 9h | 10.530 |
| SRR8749030 | Uninduced | 4.055 |
| SRR8749031 | Uninduced | 4.455 |
| SRR8749032 | Uninduced | 3.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.567 |
| SRR8400027 | Control - Root | 32.119 |