Gene detail information of Glyur000473s00018940 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55250.1 | 4.00E-83 | |
| NR | XP_003542693.2 | 3.01E-143 | PREDICTED: uncharacterized protein LOC100795176 [Glycine max] |
| trEMBL | tr|K7M088|K7M088_SOYBN | 1.00E-143 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G23810.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00473 | 42411 | 44901 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.459 |
| SRR1783600 | control | 8.206 |
| SRR1783602 | moderate drought stress | 10.387 |
| SRR1811619 | moderate drought stress | 10.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.232 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.063 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.992 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.889 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.679 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.069 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 87.485 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 80.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.407 |
| SRR2868004 | Drought Stress (root) | 7.417 |
| SRR2967015 | Control (root) | 9.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 62.045 |
| SRR9715740 | Leaf | 42.065 |
| SRR9715741 | Leaf | 54.562 |
| SRR9715739 | Root | 1.100 |
| SRR9715742 | Root | 5.454 |
| SRR9715743 | Root | 4.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.761 |
| SRR8749028 | MeJA induced 9h | 5.771 |
| SRR8749029 | MeJA induced 9h | 2.542 |
| SRR8749030 | Uninduced | 1.844 |
| SRR8749031 | Uninduced | 0.201 |
| SRR8749032 | Uninduced | 1.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.184 |
| SRR8400027 | Control - Root | 8.322 |