Gene detail information of Glyur000472s00019592 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62600.1 | 2.00E-142 | DNAJ heat shock family protein |
| NR | XP_003521587.1 | 0 | PREDICTED: dnaJ homolog subfamily B member 11 [Glycine max] |
| COG | YP_004624859.1 | 2.00E-43 | chaperone protein DnaJ [Thermodesulfatator indicus DSM 15286] |
| Swissprot | tr|Q9LZK5|DNJ19_ARATH | 0 | DnaJ protein ERDJ3B (Precursor) |
| trEMBL | tr|I1JQQ6|I1JQQ6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G37650.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00472 | 128764 | 132504 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000472s00019592.1 | PF00226.26 | DnaJ | 28 | 89 | 1.10E-28 |
| Glyur000472s00019592.1 | PF01556.13 | CTDII | 244 | 322 | 1.00E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.693 |
| SRR1783600 | control | 27.418 |
| SRR1783602 | moderate drought stress | 18.969 |
| SRR1811619 | moderate drought stress | 19.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.460 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.884 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.389 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.897 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.216 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.684 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.571 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.250 |
| SRR2868004 | Drought Stress (root) | 29.274 |
| SRR2967015 | Control (root) | 29.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.841 |
| SRR9715740 | Leaf | 32.421 |
| SRR9715741 | Leaf | 28.863 |
| SRR9715739 | Root | 2.202 |
| SRR9715742 | Root | 12.651 |
| SRR9715743 | Root | 9.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.418 |
| SRR8749028 | MeJA induced 9h | 5.900 |
| SRR8749029 | MeJA induced 9h | 5.172 |
| SRR8749030 | Uninduced | 4.533 |
| SRR8749031 | Uninduced | 2.143 |
| SRR8749032 | Uninduced | 1.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.403 |
| SRR8400027 | Control - Root | 22.969 |