Gene detail information of Glyur000472s00019589 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G02660.1 | 3.00E-170 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003591428.1 | 0 | Lipase [Medicago truncatula] |
| COG | YP_001515819.1 | 9.00E-07 | lipase [Acaryochloris marina MBIC11017] |
| trEMBL | tr|I1JBH3|I1JBH3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G01720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00472 | 115509 | 119123 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000472s00019589.1 | PF01764.20 | Lipase_3 | 369 | 506 | 5.90E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.250 |
| SRR1783600 | control | 3.187 |
| SRR1783602 | moderate drought stress | 2.677 |
| SRR1811619 | moderate drought stress | 2.718 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.084 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.878 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.330 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.325 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.870 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.698 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.011 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.540 |
| SRR2868004 | Drought Stress (root) | 9.316 |
| SRR2967015 | Control (root) | 8.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.571 |
| SRR9715740 | Leaf | 6.113 |
| SRR9715741 | Leaf | 31.540 |
| SRR9715739 | Root | 6.319 |
| SRR9715742 | Root | 19.150 |
| SRR9715743 | Root | 17.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.041 |
| SRR8749028 | MeJA induced 9h | 36.305 |
| SRR8749029 | MeJA induced 9h | 45.544 |
| SRR8749030 | Uninduced | 61.468 |
| SRR8749031 | Uninduced | 87.645 |
| SRR8749032 | Uninduced | 49.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.382 |
| SRR8400027 | Control - Root | 12.833 |