Gene detail information of Glyur000472s00019579 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02090.1 | 2.00E-24 | |
| NR | XP_003591419.1 | 9.00E-88 | Multidrug resistance protein ABC transporter family protein [Medicago truncatula] |
| trEMBL | tr|G7IDR9|G7IDR9_MEDTR | 3.00E-88 | Multidrug resistance protein ABC transporter family protein {ECO:0000313|EMBL:AES61670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00472 | 63031 | 63612 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000472s00019579.1 | PF14009.1 | DUF4228 | 1 | 177 | 3.10E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.267 |
| SRR1783600 | control | 0.281 |
| SRR1783602 | moderate drought stress | 0.327 |
| SRR1811619 | moderate drought stress | 0.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.940 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.922 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.434 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.722 |
| SRR2868004 | Drought Stress (root) | 2.825 |
| SRR2967015 | Control (root) | 1.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.513 |
| SRR9715740 | Leaf | 4.179 |
| SRR9715741 | Leaf | 1.277 |
| SRR9715739 | Root | 1.555 |
| SRR9715742 | Root | 1.974 |
| SRR9715743 | Root | 1.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.836 |
| SRR8749028 | MeJA induced 9h | 13.916 |
| SRR8749029 | MeJA induced 9h | 12.645 |
| SRR8749030 | Uninduced | 3.568 |
| SRR8749031 | Uninduced | 27.013 |
| SRR8749032 | Uninduced | 56.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.236 |
| SRR8400027 | Control - Root | 3.895 |