Gene detail information of Glyur000471s00019778 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02725.1 | 4.00E-38 | |
| NR | KEH23777.1 | 2.06E-81 | transmembrane protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072U261|A0A072U261_MEDTR | 8.00E-82 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH23777.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00471 | 84252 | 86265 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.107 |
| SRR1783600 | control | 11.423 |
| SRR1783602 | moderate drought stress | 14.580 |
| SRR1811619 | moderate drought stress | 14.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.901 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.663 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.160 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.139 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.497 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.154 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.294 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.386 |
| SRR2868004 | Drought Stress (root) | 4.116 |
| SRR2967015 | Control (root) | 4.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.461 |
| SRR9715740 | Leaf | 9.428 |
| SRR9715741 | Leaf | 8.191 |
| SRR9715739 | Root | 2.792 |
| SRR9715742 | Root | 6.454 |
| SRR9715743 | Root | 5.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.436 |
| SRR8749028 | MeJA induced 9h | 1.010 |
| SRR8749029 | MeJA induced 9h | 1.394 |
| SRR8749030 | Uninduced | 1.098 |
| SRR8749031 | Uninduced | 0.634 |
| SRR8749032 | Uninduced | 0.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.043 |
| SRR8400027 | Control - Root | 16.022 |