Gene detail information of Glyur000471s00019777 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G28150.1 | 2.00E-98 | Plant protein of unknown function (DUF868) |
| NR | XP_007162443.1 | 0 | hypothetical protein PHAVU_001G152600g [Phaseolus vulgaris] |
| trEMBL | tr|V7CW79|V7CW79_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34437.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00471 | 81988 | 82914 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000471s00019777.1 | PF05910.7 | DUF868 | 27 | 307 | 1.70E-99 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.516 |
| SRR1783600 | control | 1.429 |
| SRR1783602 | moderate drought stress | 1.821 |
| SRR1811619 | moderate drought stress | 2.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.009 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.677 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.120 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.117 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.475 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.394 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.351 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.894 |
| SRR2868004 | Drought Stress (root) | 8.178 |
| SRR2967015 | Control (root) | 9.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.045 |
| SRR9715740 | Leaf | 0.657 |
| SRR9715741 | Leaf | 0.782 |
| SRR9715739 | Root | 1.475 |
| SRR9715742 | Root | 1.938 |
| SRR9715743 | Root | 2.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.481 |
| SRR8749028 | MeJA induced 9h | 0.978 |
| SRR8749029 | MeJA induced 9h | 0.329 |
| SRR8749030 | Uninduced | 1.149 |
| SRR8749031 | Uninduced | 0.165 |
| SRR8749032 | Uninduced | 0.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.363 |
| SRR8400027 | Control - Root | 11.966 |