Gene detail information of Glyur000471s00019774.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32100.1 | 4.00E-15 | ovate family protein 16 |
| NR | XP_004493687.1 | 9.52E-66 | PREDICTED: uncharacterized protein LOC101510888 [Cicer arietinum] |
| Swissprot | tr|Q9SKY9|OFP16_ARATH | 1.00E-24 | Transcription repressor OFP16 |
| trEMBL | tr|A0A072U262|A0A072U262_MEDTR | 2.00E-63 | Ovate transcriptional repressor {ECO:0000313|EMBL:KEH23782.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00471 | 67623 | 70818 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000471s00019774.1 | PF04844.8 | Ovate | 226 | 288 | 1.20E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.210 |
| SRR1783600 | control | 1.228 |
| SRR1783602 | moderate drought stress | 1.564 |
| SRR1811619 | moderate drought stress | 1.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.015 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.232 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.226 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.255 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.346 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.096 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.645 |
| SRR2868004 | Drought Stress (root) | 0.993 |
| SRR2967015 | Control (root) | 0.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.433 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.136 |
| SRR9715739 | Root | 1.075 |
| SRR9715742 | Root | 0.239 |
| SRR9715743 | Root | 0.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.006 |
| SRR8749032 | Uninduced | 0.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.213 |
| SRR8400027 | Control - Root | 2.046 |