Gene detail information of Glyur000471s00019771 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G63210.1 | 5.00E-26 | Protein of unknown function (DUF581) |
| NR | NP_001241512.1 | 9.47E-107 | uncharacterized protein LOC100788456 [Glycine max] |
| trEMBL | tr|C6T7F7|C6T7F7_SOYBN | 4.00E-107 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G34060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00471 | 53229 | 55668 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000471s00019771.1 | PF04570.9 | DUF581 | 245 | 292 | 6.80E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.489 |
| SRR1783600 | control | 45.798 |
| SRR1783602 | moderate drought stress | 44.590 |
| SRR1811619 | moderate drought stress | 44.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 57.905 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 57.425 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 51.190 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 50.184 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 60.480 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 60.103 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.811 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.274 |
| SRR2868004 | Drought Stress (root) | 47.801 |
| SRR2967015 | Control (root) | 59.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.705 |
| SRR9715740 | Leaf | 2.384 |
| SRR9715741 | Leaf | 2.666 |
| SRR9715739 | Root | 15.622 |
| SRR9715742 | Root | 26.042 |
| SRR9715743 | Root | 23.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.265 |
| SRR8749028 | MeJA induced 9h | 33.310 |
| SRR8749029 | MeJA induced 9h | 15.603 |
| SRR8749030 | Uninduced | 9.556 |
| SRR8749031 | Uninduced | 15.686 |
| SRR8749032 | Uninduced | 11.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 46.423 |
| SRR8400027 | Control - Root | 46.715 |