Gene detail information of Glyur000471s00019767 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22600.1 | 1.00E-17 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | AFK46030.1 | 1.61E-57 | unknown [Medicago truncatula] |
| Swissprot | tr|Q9ZQI8|NLTL2_ARATH | 4.00E-13 | Non-specific lipid-transfer protein-like protein At2g13820 (Precursor) |
| trEMBL | tr|I3T0I8|I3T0I8_MEDTR | 6.00E-58 | Uncharacterized protein {ECO:0000313|EMBL:AFK46030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00471 | 32754 | 33493 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000471s00019767.1 | PF14368.1 | LTP_2 | 20 | 118 | 3.20E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 86.718 |
| SRR1783600 | control | 87.151 |
| SRR1783602 | moderate drought stress | 65.230 |
| SRR1811619 | moderate drought stress | 65.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 45.909 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.189 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.045 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.104 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.530 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 48.999 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.965 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.021 |
| SRR2868004 | Drought Stress (root) | 28.900 |
| SRR2967015 | Control (root) | 27.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.634 |
| SRR9715740 | Leaf | 2.670 |
| SRR9715741 | Leaf | 3.554 |
| SRR9715739 | Root | 12.890 |
| SRR9715742 | Root | 22.757 |
| SRR9715743 | Root | 16.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.542 |
| SRR8749028 | MeJA induced 9h | 0.158 |
| SRR8749029 | MeJA induced 9h | 0.090 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.490 |
| SRR8400027 | Control - Root | 37.724 |