Gene detail

Gene detail information of Glyur000470s00020952

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G07620.1	8.00E-123	Protein kinase superfamily protein
NR	XP_003531799.1	0	PREDICTED: putative kinase-like protein TMKL1-like isoform X1 [Glycine max]
COG	YP_006805216.1	1.00E-15	serine/threonine protein kinase [Nocardia brasiliensis ATCC 700358]
Swissprot	tr\|P33543\|TMKL1_ARATH	1.00E-64	Putative kinase-like protein TMKL1 (Precursor)
trEMBL	tr\|I1KW09\|I1KW09_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G24850.1}

Sequence

Transcript Sequence

>Glyur000470s00020952.1
AGCAGAGTCAAATTTAGAAAGACCAACACCACATGCCTTAGATCTGTGTCACATTGCATTCACATTGGGGCATTCCAGCGTGTATGCTCTTAACTCTTCCAAATTCCCCACCCCAGAAAGTCCTTCATTGCTAAGTCCTCTTCTCTGGCATCTCTTCCCTCTCCCTCACTCACACTCCTTATGTCCATTTCTGCTCCAATAATTGAACAACTTTTGCCACCTCTGGTAAATTCCCACACCACAAAGTTCCCTTGAACATGCTTCTCCTTGTCCTTGTCCTATATCCACATGGGGAATATTATTACTTTCCAGGAAAATCAAGCCAGTTTTCCCATCCAAATGAGCCCCTCTCAGTCTCTATCATGAGACCCAGATCCTAATTCCCACTNCCTTCTATCCCCATTATCTCAATTATCTACACCCTGCTACTCTGATACAAAAAGATCAGGTTTTGCAGAAAAAGAAAACCACCCTCATGCTGATATTAGTTCTTGGACTAGCTTCAGCTACTTTTCTAGTGATTGTTGCACTTTATGTCTTCTTTTACTACTTGAAAAGACCATCAAAACATGAGAGTACTAAAGACATAGAAAGCTNAGAGCAGAAGCAGGAGGAGGAGGAGGAGATAGCTCAGAAGGAGGACTTGATCATCTTTCAAGGTGGGGAGGACTTGACAATATGTGACATATTGGATGCTCCAGGGGAAGTGATTGGGAAATCCAATTATGGGACACTGTATAAGGCTTTGTTGCAAAGGAGCAACAAAGTGAGGCTGCTGAGGTTTCTGAGACCAGTGTGCACTACAAGAGCTGAAGAATTGGATGAAATGACTCAGTTTCTTGGAAGGATAAGGCATCCTAATTTGGTTCCTCTTCTGGGGTTTTACACNGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCCTTCTACAGGCATGGGAATCTGACTCAATTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATATGTAGAATATCGGTCGGTATAGCCAAAGGACTAGAGCATCTTCACACAGGACAGGAGAAGCCAATTATCCATGGAAACCTCAAGTCTAAAAACATCCTCTTGGACCGCGCCTACCAACCGTACATNGCAGATTCAGGCCTCCATCTTCTGTTGAATCCTACTGCTGGCCAAGAAATGCTTGAAAGTTCAGCTGCTCAGGGCTATAAGGCGCCTGAGCTTATCAAAATGAAGGATGCTAGTGAAGAGACTGATATATATAGCCTTGGTGTGATCTTGCTGGAGTTACTTTCAGGAAAGGAACCTATCAATGAGCATCCAACTCCTGATGAGGATTTCTATCTCCCAAATTTCATGAGAAATGCTGTCCTTGGACACAGAATTGCTGATTTGTACCATCCAGCCATTCTTCTAAAGAACAGCAGAGATGATAGAATTCCAGTCACAGAAGAATGCATTCTCAAATTCTTCCAACTTGCAATGGCTTGTTGCTCCACTTCACNTTCAATTAGACCTAAGATAAAGCAAGTCCTTAGGAAGCTTGAAGAAATCATACACTAGAAGTTATGGGGGGGCTTTTATGAAATTTATCTGGGGTAGTGGAGGCCATTGGCATTTTTGGCACACTTCAATTCTTCAAATTCATCATTAACAATGATGTGGTTGAAGACAATTAACATTCATATATGAGAAATTGGAAGGGAAAGAAAAAGTAAGTGTACTACTTACAAAAATGTGGAATTGGCTATCAAACAAAGACTACAGGAACAGTTGATCGTTGATGTTAAGTATTAAAGTCAAAAGAGGAATTATAGCTTGAAACTAAAGCTGTGCCTATTTATTTCTAGATGTAAAATCTAGCTCCTAAAATTACTGACTTTGATTTTGAGATTGTTGAGTTTATGTGACATGTGACATGGACAGTGGCAAATTAACTTCTTTGACGAGACACTTATCTCACCATAACTTGCACAACAGCAGAGTTTTCCTGGGAGAATATGAAGATTCTTTTACTATAAAGAATGTGCTGCCCAAGAATTTGTAGCTAGTCTCTGAGTTTTACTGTTGTGAGAAGACACAGAATCTGTGATGGAAAAATGTTCTTTGTATCAACAATGCCCCCATCAAATTCCATGTTGTTATTACCTTAGAATTGAAACTGCAAAAGTGCAAAGGAATCTCAATAATTATGTAGGCCAGGTAGTGGGATTATTTGGTCTTTGAGCCATTACTCTTATCATGCACTACAAGTGTCTGGAGAACCATGATAGATTTCAAAATCCCAACTACAAGAAGTTATAATGTTTTTTGTCTCTTGTTTAGGTCTCACAGCAATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00470	78197	81332	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.Other

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000470s00020952.1	PF00069.20	Pkinase	77	351	4.80E-31

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.206
SRR1783600	control	11.119
SRR1783602	moderate drought stress	8.886
SRR1811619	moderate drought stress	8.986

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.189
DRR006520	Root Summer glycyrrhizin high producing strain	12.590
DRR006521	Root Winter glycyrrhizin high producing strain	3.816
DRR006522	Root Winter glycyrrhizin high producing strain	3.767
DRR006523	Root Summer glycyrrhizin low producing strain	10.511
DRR006524	Root Summer glycyrrhizin low producing strain	10.631
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.654
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.493

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.993
SRR2868004	Drought Stress (root)	9.720
SRR2967015	Control (root)	11.668

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.504
SRR9715740	Leaf	15.773
SRR9715741	Leaf	9.355
SRR9715739	Root	1.428
SRR9715742	Root	4.653
SRR9715743	Root	3.748

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.937
SRR8749028	MeJA induced 9h	2.999
SRR8749029	MeJA induced 9h	1.644
SRR8749030	Uninduced	0.214
SRR8749031	Uninduced	0.033
SRR8749032	Uninduced	0.161

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.936
SRR8400027	Control - Root	14.695