Gene detail information of Glyur000468s00019644 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52565.1 | 7.00E-14 | |
| NR | KHN01335.1 | 5.27E-48 | hypothetical protein glysoja_009541 [Glycine soja] |
| trEMBL | tr|I1KVD9|I1KVD9_SOYBN | 3.00E-48 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G22610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00468 | 158117 | 159134 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.171 |
| SRR1783600 | control | 4.141 |
| SRR1783602 | moderate drought stress | 4.007 |
| SRR1811619 | moderate drought stress | 3.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.220 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.212 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.250 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.122 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.109 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.112 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 47.845 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 47.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.647 |
| SRR2868004 | Drought Stress (root) | 34.081 |
| SRR2967015 | Control (root) | 40.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 100.342 |
| SRR9715740 | Leaf | 78.235 |
| SRR9715741 | Leaf | 121.234 |
| SRR9715739 | Root | 1.863 |
| SRR9715742 | Root | 4.857 |
| SRR9715743 | Root | 3.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.033 |
| SRR8749028 | MeJA induced 9h | 17.591 |
| SRR8749029 | MeJA induced 9h | 9.965 |
| SRR8749030 | Uninduced | 63.545 |
| SRR8749031 | Uninduced | 150.464 |
| SRR8749032 | Uninduced | 58.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.713 |
| SRR8400027 | Control - Root | 13.861 |