Gene detail information of Glyur000468s00019630 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42900.1 | 2.00E-29 | Plant basic secretory protein (BSP) family protein |
| NR | XP_003599875.1 | 3.76E-106 | hypothetical protein MTR_3g048300 [Medicago truncatula] |
| trEMBL | tr|G7IXZ8|G7IXZ8_MEDTR | 1.00E-106 | Peptidase {ECO:0000313|EMBL:AES70126.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00468 | 63599 | 64531 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000468s00019630.1 | PF04450.7 | BSP | 74 | 301 | 4.00E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.634 |
| SRR1783600 | control | 11.163 |
| SRR1783602 | moderate drought stress | 5.647 |
| SRR1811619 | moderate drought stress | 5.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.601 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.567 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.182 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.521 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.490 |
| SRR2868004 | Drought Stress (root) | 4.179 |
| SRR2967015 | Control (root) | 5.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.013 |
| SRR9715740 | Leaf | 7.937 |
| SRR9715741 | Leaf | 3.391 |
| SRR9715739 | Root | 8.972 |
| SRR9715742 | Root | 1.094 |
| SRR9715743 | Root | 2.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.375 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.097 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.164 |
| SRR8749032 | Uninduced | 0.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.510 |
| SRR8400027 | Control - Root | 11.730 |