Gene detail

Gene detail information of Glyur000468s00019620.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G06490.1	glucan synthase-like 7
NR	XP_004499983.1	PREDICTED: callose synthase 7-like [Cicer arietinum]
Swissprot	tr\|Q9LYS6\|CALS6_ARATH	Putative callose synthase 6
trEMBL	tr\|G7IXI4\|G7IXI4_MEDTR	Callose synthase-like protein {ECO:0000313\|EMBL:AES70070.2}

Sequence

Transcript Sequence

>Glyur000468s00019620.1
ATGGCCAGCACCAGTGGCACAAAGGGTCCTCATGAGACGATGAGGAGGCAGCCATCAAAGAGGATGATAAGGGCACCTACAAGGACTGTGGAGTTGCCAAATGAGGAGAACATTATGGAAAGTGAGATTGTGCCTTCCTCCCTTTCTGTCCTTGTGCCAATTCTCAGAGCAGCCATTGAGATTGAGGAGGAGAATCCCAGAGTTGCCTATCTTTGTCGCTTTCATGCGTTTGAGAAGGCTCATACAATGGATCCAACATCAAGTGGGCGTGGTGTTCGTCAATTCAAGACATACCTGTTGCACAAACTCGAAAAGGAAGGGGAGCTGACNGAAAGAATCGCTAAAAGAAGTGATGCTAAGGAGCTACAGACCTACTACCAAACATTCTATGAGAAGAGAATCCGGGATGGTGAATTTACTAAAAAACCGGAGGAGATGGTTAAGAATGTTCGGATTGCCATTGTGTTGTATGAAGTGCTGAAGACTTTGGTACCTTCAAACAGTATTGAGGAGAAGACAAAAAGATATGCTGAAGATGTTGAGAATAAGAGGGGACAATATGAGCATTACAATATCCTTCCATTATATGCTGTTGGTGTTAAACCAGCAATCATGGAACTTNCCGAGATCAAAGCAGCAATTNCTGCTTTAAGTAAGGTGGATAATCTTCCAATGCCTGTCATTCGTTCAAGACCTGATGCTTTTAATGAGGATTCTACAATGCCTACTGAGAGAGTTAGAAATGTGAACNATATACTCGATTGGATTGCCTCAATTTATGGGTTTCAGAAAGGAAATGTGGCAAATCAAAGGGAGCATCTTATATTATTACTTGCCAACATGAATATAGGGAATAGGACTGATTCTGACGAGATCCATGAAGAAACTGTAGAAAAGTTGATGGCTAAAATTTTCAAAAATTATGAGTCATGGTGTCATTATGTGCGTCGTGAATCCCATCTTAGGTTTCCAGATGATCTAGACAGACAACAGTTAGAACTGATTTACATTGCACTTTATCTTCTAATATGGGGAGAAGCTTCAAATATTCGCTTTATGGCTGAATGCCTTTGCTATATTTTCCATCATATGTGCGATGAAGTCTTTGGGATTTTACATAGCAATGTCCATCGTGTGAGTGGGGATGCATACCAAATAGTAGCACGTGATGATGAATATTTTCTCATGGAAGTTATAACACCTATATATAATGTTTTAATGATGGAAGCAAAGAGAGGTAACAAAGGAAAGGCAAGCCATTCCAGTTGGAGAAATTATGACGATCTTAATGAGTACTTTTGGTCTGACAAATGTTTCAAGATAGGTTGGCCAATGAATCTCAATGCAGATTTTTTTAGGCATGATGAAACACAACCAGCACATCAGGGACGTAGCCAAGCCAGCACTGGATCTGGGAAGAAGAAGCCTAAAACAAATTTTGTTGAAGTTCGTACATTTTTGCATCTGTATCGGAGTTTTGATCGAATGTGGATATTTTTCATATTGGCTTTACAGGCAATGATTATTATTGCTTGGAGTTCCTTGGGACCTATTGAAGTGCTTTCCGATGCCGATGTCTTCAGAAATGTTATGACTATATTCATCACATATGCTTTTCTCAATTTTCTTCAAGTAACCATTGATATTATTCTTATCTGGAATGCATTGAGGAATATGAAATTCACTCAGTTGCTTCGGTATTTTCTGAAATTTGCGGTAGCAGCTGTTTGGGTTGTTGTCTTGCCAGTCAGTTATTCTAGTTCTCTGCAGAGTCCATCNGGGCTTATAAAATTTGTCACCAGTTGGGCTGGGGATTGGGGGGGCCAATCACTTTATGCCTATGTTGTTGCATTATACATGTTACCAAACATAGTGGCTGCAATACTATTTTTCCTTCCACCTCTGCGGAGAACATTGGAGCGCTCAAATATGCGAATCATTACCCTTTTAATGTGGTGGGCTCAGCCAAAATTGTACGTAGGCAGGGGCATGCATGAGAGCATATTTTCGCTGCTGAAGTACACCTTCTTCTGGATCATGCTGCTAATTAGCAAGCTAGCATTCAGTTACTATGTGGAGATATCACCTCTTGTTGGTCCCACAAAATTAATCNTGCGGATGCATATAGATAACTACCAGTGGCATGAATTCTTTCCAGAAAACGAAACTCACAATATATGTGTTGTCATTGCAATATGGGCTCCAATTATCCTGGTTTATTTTATGGATACTCAAATATGGTATGCCATTTATGCCACTTTATTTGGTGGGATTGTTGGAGCCTTCAGCCATTTGGGTGAGATAAGGACACTTGGAATGCTCCGCTCCAGATTTCAGTCAGTACCACTAGCTTTCAGTCAACGCTTTTGGACTGGAAGTAACAGAAAGAATATACAGGAGGAATTGGATGATTCATATGAACGGTATAATATTGCATACTTCTCTCAGGTGTGGAATGAGTTTATAAATTCTATGAGGGAGGAAGACCTCATCAGTAACAGGGATAGAGATTTGCTTCTTGTTCCCTACAGTTCAATTGATGTTTCTGTCATTCAGTGGCCACCATTCTTGCTTGCTAGCAAGATTCCTATAGCTGTTGACATGGCAAAAGATTATAAGAAGGATGACGATGCTGAATTGTTTAAAAAGATTAAGAATGATGGGTATATGTATTCAGCAGTTGTCGAATGCTACGAGACTCTCAAGGACATNATGTCGAACCTTCTGAAAGATGAAGAAGATAAGGAGATTATTGAACGTATATGCCGCAAAGTAGATTATTGCATAAATGAGGGAACATTTGTCAAAGAATTCAAGATGACTGGCTTGCCTTCACTTAGTGAGAAGTTGGAGAAATTCTTATCTCTATTGCTATCTGAAGATGGCAAAGTTGAGTCCCAGATAGTCAATGTCCTGCAGGATATTGTAGAGATTATCATACAGGATGTTATTGTCGATGGCCATGTAATTCTGCAAACATCTAAGCATTATAATGTAGAGAGAGGGCAGAGGTTTGTTAACATTGACACTTCTTTTACACACAAGAGATCAGTGATGGAGAAGGTTATTAGACTTCAGTTGCTTTTAAAAGAAAAGGAATCAGGCATAAATGTGCCCCGAAATCTGGATGCCCGCCGCCGTATTACATTCTTTGCAAACTCCTTATTTATGAATATGCCAAGGGCTCCTAGAGTTCGGGACATNATGTCCTTCAGTGTTCTAACACCGTATTACACCGAAGATGTTCAATATTCAACCGAAGAACTCAATTTGGAAAATGAAGATGGAATATCAATTTTGTTCTACCTAAGGAAGATCTATCCTGATGAATGGGATAATCTCCATGAGCGCATAAAAGCTGAACATCTTGGAGAGGATAAGGAAGAGTTAATTCGTCAGTGGGCATCTTACAGAGGCCAGACACTCTATCGAACAGCTATTTCTGAAGGCTACCGGACAGTGGATTTCTATGAAAAAGATAAGAGGCTTCTTGAAGAAGCACAAGCTCTGGCTGATTTGAAGTTCACCTATGTTGTTTCTTGTCAATTGTATGGTGCTCATAAAAAGTCCAAAGATAAAAAAGAGAGAAGNAGCTATAATAATATTCTCAATCTGATGTTAACACATTCAGCCCTTCGTGTTGCTTACATAGATGAAAGAGAAGACACACAAGTGGGAAAGAAAGTCTATTACTCCGTTCTTGTCAAGGGAGGGGAGAAGTATGATGAGGAAATATATCGCATCAAGCTTCCTGGTCCTCCAACAGAAATTGGTGAAGGTAAACCTGAAAACCAAAATCATGCCATTATATTTACTCGTGGAGAAGCCTTGCAGACCATAGACATGAATCAGGATAATTACTATGAAGAAGCTTTCAAAATGAGAAATGTATTGGAAGAATTCCGGAAAGGTCGAGGGCAACGCAAACCCACCATATTGGGGTACAATTCAACTCTACGTCAAGGATTTATCACACATCACGAGTACATACAAGTTGGTAAGGGGCGTGACGTGGGCATGAACCANATTTCACTCTTTGAGGCTAAAGTTGCAAATGGAAATGGAGAACAAACACTGAGCCGTGATGTTTATCGTCTTGGCCGACGATTTGACTTCTTCAGAATGTTGTCATTCTACTTCACAACAGTTGGCTTCTATTTCAGCAGCATGGTATTTGCACTTTCTTGGGCAGTTTTGGTTATAATCCTCATTGTCTTAAAGATGGTTTCCATGGGTAGACGAAGATTTGGCACCGACTTTCAGCTCATGTTCCGTATTCTCAAGGCACTTCTCTTTCTCGGGTTCTTGTCAACCATGACAGTTTTATTCGTTGTATGTGCGCTTACTGTGTCAGATTTGTTTGCTGCCATTCTCGCCTTCATGCCCTCTGGATGGGCCATTATTCTGATTGCACAAACATGCAGGGGATTCATGAAGGGAGCTAAACTATGGGCTTCAGTAAAAGAGCTTTCCAGAGCATATGAATATATAATGGGATTAATAATCTTCATGCCAACAGCTGTTTTGTCATGGTTCCCATTTGTGTCAGAGTTCCAAACCCGGTTGCTATTCAACCAAGCATTCAGTAGAGGGCTCCAG

Protein Sequence

>Glyur000468s00019620.1
MASTSGTKGPHETMRRQPSKRMIRAPTRTVELPNEENIMESEIVPSSLSVLVPILRAAIEIEEENPRVAYLCRFHAFEKAHTMDPTSSGRGVRQFKTYLLHKLEKEGELTERIAKRSDAKELQTYYQTFYEKRIRDGEFTKKPEEMVKNVRIAIVLYEVLKTLVPSNSIEEKTKRYAEDVENKRGQYEHYNILPLYAVGVKPAIMELXEIKAAIXALSKVDNLPMPVIRSRPDAFNEDSTMPTERVRNVNXILDWIASIYGFQKGNVANQREHLILLLANMNIGNRTDSDEIHEETVEKLMAKIFKNYESWCHYVRRESHLRFPDDLDRQQLELIYIALYLLIWGEASNIRFMAECLCYIFHHMCDEVFGILHSNVHRVSGDAYQIVARDDEYFLMEVITPIYNVLMMEAKRGNKGKASHSSWRNYDDLNEYFWSDKCFKIGWPMNLNADFFRHDETQPAHQGRSQASTGSGKKKPKTNFVEVRTFLHLYRSFDRMWIFFILALQAMIIIAWSSLGPIEVLSDADVFRNVMTIFITYAFLNFLQVTIDIILIWNALRNMKFTQLLRYFLKFAVAAVWVVVLPVSYSSSLQSPSGLIKFVTSWAGDWGGQSLYAYVVALYMLPNIVAAILFFLPPLRRTLERSNMRIITLLMWWAQPKLYVGRGMHESIFSLLKYTFFWIMLLISKLAFSYYVEISPLVGPTKLIXRMHIDNYQWHEFFPENETHNICVVIAIWAPIILVYFMDTQIWYAIYATLFGGIVGAFSHLGEIRTLGMLRSRFQSVPLAFSQRFWTGSNRKNIQEELDDSYERYNIAYFSQVWNEFINSMREEDLISNRDRDLLLVPYSSIDVSVIQWPPFLLASKIPIAVDMAKDYKKDDDAELFKKIKNDGYMYSAVVECYETLKDXMSNLLKDEEDKEIIERICRKVDYCINEGTFVKEFKMTGLPSLSEKLEKFLSLLLSEDGKVESQIVNVLQDIVEIIIQDVIVDGHVILQTSKHYNVERGQRFVNIDTSFTHKRSVMEKVIRLQLLLKEKESGINVPRNLDARRRITFFANSLFMNMPRAPRVRDXMSFSVLTPYYTEDVQYSTEELNLENEDGISILFYLRKIYPDEWDNLHERIKAEHLGEDKEELIRQWASYRGQTLYRTAISEGYRTVDFYEKDKRLLEEAQALADLKFTYVVSCQLYGAHKKSKDKKERXSYNNILNLMLTHSALRVAYIDEREDTQVGKKVYYSVLVKGGEKYDEEIYRIKLPGPPTEIGEGKPENQNHAIIFTRGEALQTIDMNQDNYYEEAFKMRNVLEEFRKGRGQRKPTILGYNSTLRQGFITHHEYIQVGKGRDVGMNXISLFEAKVANGNGEQTLSRDVYRLGRRFDFFRMLSFYFTTVGFYFSSMVFALSWAVLVIILIVLKMVSMGRRRFGTDFQLMFRILKALLFLGFLSTMTVLFVVCALTVSDLFAAILAFMPSGWAIILIAQTCRGFMKGAKLWASVKELSRAYEYIMGLIIFMPTAVLSWFPFVSEFQTRLLFNQAFSRGLQ

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00468	3070	20810	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT48

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006075 (1->3)-beta-D-glucan biosynthetic process

cellular_component

GO:0000148 1,3-beta-D-glucan synthase complex

GO:0016020 membrane

molecular_function
GO:0003843 1,3-beta-D-glucan synthase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000468s00019620.1	PF04652.11	DUF605	52	174	6.60E-07
Glyur000468s00019620.1	PF14288.1	FKS1_dom1	333	445	7.60E-41
Glyur000468s00019620.1	PF02364.10	Glucan_synthase	1038	1130	6.10E-26
Glyur000468s00019620.1	PF02364.10	Glucan_synthase	1134	1305	1.60E-42
Glyur000468s00019620.1	PF02364.10	Glucan_synthase	1314	1409	3.80E-34

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.236
SRR1783600	control	2.178
SRR1783602	moderate drought stress	3.395
SRR1811619	moderate drought stress	3.322

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.520
DRR006520	Root Summer glycyrrhizin high producing strain	3.649
DRR006521	Root Winter glycyrrhizin high producing strain	1.359
DRR006522	Root Winter glycyrrhizin high producing strain	1.416
DRR006523	Root Summer glycyrrhizin low producing strain	4.022
DRR006524	Root Summer glycyrrhizin low producing strain	3.700
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.697
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.477

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.969
SRR2868004	Drought Stress (root)	14.457
SRR2967015	Control (root)	13.500

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.448
SRR9715740	Leaf	1.285
SRR9715741	Leaf	1.857
SRR9715739	Root	0.277
SRR9715742	Root	6.700
SRR9715743	Root	4.899

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.607
SRR8749028	MeJA induced 9h	2.441
SRR8749029	MeJA induced 9h	0.813
SRR8749030	Uninduced	1.193
SRR8749031	Uninduced	0.739
SRR8749032	Uninduced	0.760

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.693
SRR8400027	Control - Root	9.662