Gene detail

Gene detail information of Glyur000467s00022337

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G07990.1	4.00E-119	Cytochrome P450 superfamily protein
NR	XP_003547756.2	0	PREDICTED: flavonoid 3'-monooxygenase-like [Glycine max]
COG	YP_004960862.1	2.00E-31	cytochrome P450 family protein [Streptomyces bingchenggensis BCW-1]
Swissprot	tr\|Q9SD85\|F3PH_ARATH	4.00E-143	Flavonoid 3'-monooxygenase
trEMBL	tr\|I1MK13\|I1MK13_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA16G01060.1}

Sequence

Transcript Sequence

>Glyur000467s00022337.1
CAGGCATTAGAAAATTAAGATAAAAATGATTATGGCCTAAACAACGACACATGCGGATCACGAAGAGAGAAAAATCCAAAATGTACAAAATAAGCACCTGCTTTATGGAAAGTTAGTTGAAGCCCAGGNGGGGCCTCAAGCTGTTGCTTGTCTACCATCTTGTGTACATAAATAGCCAACTCACCCATTCAATCACTCATCACAAACACTAGTTACACCACTNCTCTCCCAAGTCCCAAAAGCCCTTATACCAAAGATGGCAATTATTGAATTCACATCTCCTAGTTGGGTCACAGCTGCAGCCACATGGTTTGCAGCCTTCGCCATCGTCGTCCTCTTCGGCCGCCNCCTCCGCCGCCGTAAGAGTTACAACCTGCCACCAGGCCCAAAGCCATGGCCCATCATAGGAAACCTGAACCTCATTGGATCCCTNCCACACCAATCCCTCCACGCACTCAGCCAAAAATACGGGCCCATCATGCACGTCTGGTTCGGGTCCAACCCGGTCGTCGTGGGCTCCACCGTGGACATGGCCAAGGCCTTCCTGAAAACCCACGACGCCGCCCTCGCGGGCCGGCCCAAATTCGCGGCCGGGAAATACACAACCTACAACTACTCGGACATAACCTGGTCCCAATACGGCCCATACTGGCGACAGGCCCGTAGAATGTGCCTATTGGAACTGTTCAGCGCGAAACGCCTGGAGTCCTATGAGTACATCCGAAGACAAGAGCTGAAGTCTTTTCTCAACGAACTCTTCCGCTCAGCGAACAGAACCGTGTTGTTGAAGGACCACCTTTCTACGCTGAGCCTCAACGTGATAAGCCGAATGGTGTTGGGGAAGAAGTACTTGGAGGAATCCGAGAACGCGATTATTTCCCCTGAGGAGTTCAAGAAGATGCTTGATGAGTTGTTTTTGCTGAATGGGGTTCTCAACATTGGGGATTTCATCCCTTGGGTCGATTTCTTGGACCTGCAGGGTTACATAAAGAGGATGAAGGCGTTGAGCAAGAAGTTTGATAAGTTTATGGAGCATGTGTTGGAGGAACACATTCAGAGGAGGAAAGCGGTTAAGGACTATGTNGCAAAAGACATGGTGGATGTGCTTTTGCAGCTTGCAGAGGATCCTAGCCTTGAAGTCAAGCTTGAGAGGCATGGAGTCAAAGCTTTTACTCAGGACCTAATAGCAGGTGGGACAGAGAGCTCTGCAGTGACTGTAGAATGGGCAATCACGGAGCTGGTGAGAAGGCCAGAGATGTTCAAGAGAGCAACAGAGGAGCTAGACAGGGTAATAGGGAGAGATAGATGGGTTGAAGAGAAGGACATTGTCAATTTGCCTTATGTCACAGCCGTTGCCAAGGAAACAATGAGGCTTCACCCTGTGGCACCAATGCTAGTGCCAAGGCTAGCAAGGGAGGATTGCAATATTGGTGGGTATGACATCCCAAAAGGGACACAAGTACTTGTCAATACTTGGACTATTGGTAGAGACCCTGAGATTTGGGACAACCCAGATGAGTTCCAACCTGAGAGGTTTCTAGCTAAAGAGATTGATGTGAAAGGCCATGACTTTGAGTTGTTGCCATTTGGTGCTGGTAGAAGGATGTGCCCTGGTTACCCTCTTGGAATTAAGGTGATTTATGCAAGTTTGGCCAACCTTTTGCATGGGTTCAATTGGAGGCTACCTGATAGTGTAAAGAAAGAGGACTTGAATATGGAGGAGATTTTTGGGCTCTCCACACCTAAGAAAATACCTCTTGAAGTTGTTGTAGAGCCTAGACTTCCAGCTCAGCTTTACTCCCTCTGAGTATTTTTCTCTACTCTCAAAGGTTTTCTCTATAGTAAGATATATTGGGAATAATGGGGTTTTGTGTAAGCTTAATGTCATCATATATACTCCATGGCAAGAAAGAAGAAAAAGAATAAAAGTGAGCGTGATAATGAAGAGAAGTTATGATAATGTTGGAAACTTGGAGTTTATCAATTAGTGTAAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00467	148644	151965	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP98A3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000467s00022337.1	PF00067.17	p450	41	496	1.40E-102

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.401
SRR1783600	control	14.574
SRR1783602	moderate drought stress	13.477
SRR1811619	moderate drought stress	13.341

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.202
DRR006520	Root Summer glycyrrhizin high producing strain	8.051
DRR006521	Root Winter glycyrrhizin high producing strain	5.530
DRR006522	Root Winter glycyrrhizin high producing strain	5.448
DRR006523	Root Summer glycyrrhizin low producing strain	48.327
DRR006524	Root Summer glycyrrhizin low producing strain	48.250
DRR006525	Leaf Summer glycyrrhizin high producing strain	56.489
DRR006526	Leaf Summer glycyrrhizin high producing strain	56.474

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	153.095
SRR2868004	Drought Stress (root)	276.590
SRR2967015	Control (root)	219.458

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	60.753
SRR9715740	Leaf	33.312
SRR9715741	Leaf	81.667
SRR9715739	Root	21.165
SRR9715742	Root	183.165
SRR9715743	Root	146.637

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.774
SRR8749028	MeJA induced 9h	27.435
SRR8749029	MeJA induced 9h	6.040
SRR8749030	Uninduced	18.367
SRR8749031	Uninduced	1.113
SRR8749032	Uninduced	1.866

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	38.247
SRR8400027	Control - Root	63.624