Gene detail information of Glyur000467s00022336 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25340.1 | 8.00E-19 | Ubiquitin-like superfamily protein |
| NR | AFK47791.1 | 5.23E-24 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T5J9|I3T5J9_LOTJA | 2.00E-24 | Uncharacterized protein {ECO:0000313|EMBL:AFK47791.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00467 | 145406 | 146360 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.209 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.183 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.545 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.296 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.103 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.391 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.521 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.342 |
| SRR2868004 | Drought Stress (root) | 3.779 |
| SRR2967015 | Control (root) | 2.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.075 |
| SRR9715741 | Leaf | 0.040 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.079 |
| SRR8749028 | MeJA induced 9h | 2.614 |
| SRR8749029 | MeJA induced 9h | 2.393 |
| SRR8749030 | Uninduced | 0.857 |
| SRR8749031 | Uninduced | 0.479 |
| SRR8749032 | Uninduced | 2.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |