Gene detail information of Glyur000467s00022323 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72510.2 | 6.00E-40 | Protein of unknown function (DUF1677) |
| NR | AFK42766.1 | 1.58E-87 | unknown [Medicago truncatula] |
| trEMBL | tr|G7L7L9|G7L7L9_MEDTR | 6.00E-88 | Uncharacterized protein {ECO:0000313|EMBL:AFK42766.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00467 | 80550 | 82403 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000467s00022323.1 | PF07911.8 | DUF1677 | 33 | 124 | 1.00E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.078 |
| SRR1783600 | control | 12.009 |
| SRR1783602 | moderate drought stress | 16.109 |
| SRR1811619 | moderate drought stress | 16.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.703 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.953 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.306 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.820 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.380 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.170 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.628 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 78.717 |
| SRR2868004 | Drought Stress (root) | 104.874 |
| SRR2967015 | Control (root) | 73.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.086 |
| SRR9715740 | Leaf | 34.436 |
| SRR9715741 | Leaf | 27.298 |
| SRR9715739 | Root | 1.279 |
| SRR9715742 | Root | 4.404 |
| SRR9715743 | Root | 3.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.864 |
| SRR8749028 | MeJA induced 9h | 26.529 |
| SRR8749029 | MeJA induced 9h | 15.680 |
| SRR8749030 | Uninduced | 27.525 |
| SRR8749031 | Uninduced | 50.713 |
| SRR8749032 | Uninduced | 49.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.035 |
| SRR8400027 | Control - Root | 36.365 |