Gene detail

Gene detail information of Glyur000467s00022321

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G14075.2	Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3
NR	XP_004510512.1	PREDICTED: uncharacterized protein LOC101498678 isoform X2 [Cicer arietinum]
trEMBL	tr\|V7APB1\|V7APB1_PHAVU	Uncharacterized protein {ECO:0000313\|EMBL:ESW07419.1}

Sequence

Transcript Sequence

>Glyur000467s00022321.1
AATATCATGGCAACTGCAACCATGGCTACTGCAGCAGGTGCAGCTGCTCTTTTGTACTACACATTGAATCGGAAATTGCAGTCTCAAAGCACGGATGATGAAGATGATGAAGAAAATGGCTGTGATACACCCACTGAAGATGTGCGGTTAGGCATTGACCGTGTTACTCATAGGTTAATACAAGCCCCTGCAACATGGTTGGAGACAATTTCAACATTGTCAGAGACTCTCAGGTTCACGTATTCNGAGACACTTGGGAAATGGCCCATTGGGGATTTGGCATTTGGTATCAGCTTTCTTCTCAAGAGGCAGGGAAACTATCATGTTGAGAGTGTGTTTGGTGGTAAGGACAGTGTACAGCTGAAAGGATCTGAGATTACCGCTGAACTTAAGTATCTATTAAACTTGTTAACACTGTGTTGGCATTTCTCAAAGAAGCCCTTTCCCTTATTTCTAGAAGAAACTGGTTACACTGAAGAAAATGTTCTTTTTCGGGAACCGAAAGCAGGAATTTTGAAACCAGCTTTTACAATAATAGCTGATCACANGATGAGGTGCTTTTTGTTATTGATTCGTGGCACACATAGTATCAAAGATACTCTAACAGCTGTTACAGGAAATGTGGTACCATTTCATCACACTGTAGTTCATAAGGGGGGTGTTAGTGATGTGGTTTTAGGGTATGCGCACTGTGGAATGGTTGCTGCTGCTCGTTGGATTGCAAAGCTTGCAACTCCTTGTCTCCTTAAAGCACTTGGCCAGTACCCAGACTATGAAGTCAAGATTGTAGGACATTCTTTGGGTGGAGGCACAGCAGCAATTCTAACATATGTATTAAGAGAGCAAAAGGAACTTTCTGTGACTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCAGGCAGTAGTTTTATTACTTCTATTATAAACGGAGCTGATTTGGTGCCTACATTCTCAGCTGCATCTGTAGATGACTTGCGTTCTGAGGTGACAGCGTCAGCATGGATAAATGACTTNAGGAATCAAATTGAGCAAACAAGAATACTCAGTACTGTCTATCGTTCTGCTTCAGCACTGGGTTCTCGCCTCCCATCTATTGCCAGTGCTAGAGCAAAAGTTGTTGGGGCTGGGGCAATTTTGCAGCCAGTTTCTAATGGTACCCAGGTTGTGATGAAAAGGGCCAAGAGTATGGCTCAGGCAGCATGGACACGTCCAAACCTTAACCTATCCTCTTGGTCATGCATGGGACCCCGTCGCCGAGCAACAGGTGCTTATTCAAACTCCAGAGAAGAAGGAATTTCCCCNACATCTTCAACCTCTGACAATGTAGAAAGTTCTGATGCACTTCTTTGTTCTCCCAAGAAGGGGATAAATGCCAAGAGCATGAACCTTCCTGTATCTTCATCTGTAGAAGAGTGGTCTTCTGAAATTGAATGTGCCAATGAAAGTAGTCCAGGTGCTGAGGTGGATGTTGATCTCAATCACAGTGAGAACATGGACCATGACAGATATGAGGATCAGATGGGTGAAGTGGAGTTGTGGCAACAACTGGAGCATGAGCTGTATGACAGACCTGAAGGTGAGGAGGCTAATGTGGTTAAGGAAATCAGGGAAGAAGAGGAAGCAGCCATAACAGAGGTAGTAGGGCAAGCCCAGAGCTCTGCATCAGATATGAAAGAAGTTCACAGATTTTTCCCTCCAGGAAAAATAATGCACATTGTTACACTTCACTCTGATTCTGCTGAGTGTGAAAGTGATGGCAGCCGAACCTCTACGAGTTCAGACGAAAGCCGGCCAGATGAGACTAAGATTGGGATATTTCTAACTTCAAGGTCTCTATATAGTAAACTTAGACTTTCACAGACCATGATCAGTGATCACTTCATGCCAATTTACAGAAGGCAGATTGAAAGGCTAATTAAAGAACTTGAGGAAGAATCTACTAAGGATCATAGAACACAAGAAGTAGTGTTATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00467	62768	68171	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006629 lipid metabolic process

GO:0016042 lipid catabolic process

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000467s00022321.1	PF03893.11	Lipase3_N	54	133	2.00E-21
Glyur000467s00022321.1	PF01764.20	Lipase_3	189	326	1.40E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.458
SRR1783600	control	8.591
SRR1783602	moderate drought stress	8.337
SRR1811619	moderate drought stress	8.346

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.087
DRR006520	Root Summer glycyrrhizin high producing strain	9.253
DRR006521	Root Winter glycyrrhizin high producing strain	12.380
DRR006522	Root Winter glycyrrhizin high producing strain	11.821
DRR006523	Root Summer glycyrrhizin low producing strain	11.082
DRR006524	Root Summer glycyrrhizin low producing strain	10.681
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.406
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.799

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	16.313
SRR2868004	Drought Stress (root)	19.559
SRR2967015	Control (root)	18.901

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.391
SRR9715740	Leaf	13.232
SRR9715741	Leaf	16.636
SRR9715739	Root	0.635
SRR9715742	Root	5.701
SRR9715743	Root	4.500

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.294
SRR8749028	MeJA induced 9h	25.326
SRR8749029	MeJA induced 9h	18.454
SRR8749030	Uninduced	22.112
SRR8749031	Uninduced	53.952
SRR8749032	Uninduced	39.505

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.754
SRR8400027	Control - Root	11.363