Gene detail information of Glyur000467s00022318 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72500.1 | 5.00E-180 | |
| NR | XP_003528576.1 | 0 | PREDICTED: uncharacterized protein LOC100807956 isoform X1 [Glycine max] |
| COG | YP_007069316.1 | 7.00E-24 | serine/threonine protein kinase [Leptolyngbya sp. PCC 7376] |
| trEMBL | tr|K7KZK1|K7KZK1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G04550.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00467 | 44257 | 52672 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000467s00022318.1 | PF13768.1 | VWA_3 | 311 | 420 | 5.00E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.209 |
| SRR1783600 | control | 11.172 |
| SRR1783602 | moderate drought stress | 11.709 |
| SRR1811619 | moderate drought stress | 11.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.598 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.110 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.088 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.825 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.014 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.422 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.923 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.179 |
| SRR2868004 | Drought Stress (root) | 15.913 |
| SRR2967015 | Control (root) | 15.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.085 |
| SRR9715740 | Leaf | 8.976 |
| SRR9715741 | Leaf | 16.321 |
| SRR9715739 | Root | 7.015 |
| SRR9715742 | Root | 15.247 |
| SRR9715743 | Root | 13.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.420 |
| SRR8749028 | MeJA induced 9h | 7.992 |
| SRR8749029 | MeJA induced 9h | 5.042 |
| SRR8749030 | Uninduced | 3.448 |
| SRR8749031 | Uninduced | 1.664 |
| SRR8749032 | Uninduced | 2.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.080 |
| SRR8400027 | Control - Root | 31.985 |