Gene detail information of Glyur000466s00022906 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25810.1 | 6.00E-04 | Integrase-type DNA-binding superfamily protein |
| NR | KHN10195.1 | 2.40E-14 | Dehydration-responsive element-binding protein 3 [Glycine soja] |
| trEMBL | tr|I3T7N9|I3T7N9_MEDTR | 4.00E-14 | Uncharacterized protein {ECO:0000313|EMBL:AFK48531.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00466 | 122329 | 122577 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 107.198 |
| SRR1783600 | control | 108.151 |
| SRR1783602 | moderate drought stress | 140.936 |
| SRR1811619 | moderate drought stress | 140.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 90.709 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 76.507 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.886 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.832 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 57.543 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.561 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.898 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.345 |
| SRR2868004 | Drought Stress (root) | 30.408 |
| SRR2967015 | Control (root) | 34.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.146 |
| SRR9715740 | Leaf | 19.327 |
| SRR9715741 | Leaf | 12.694 |
| SRR9715739 | Root | 436.013 |
| SRR9715742 | Root | 236.221 |
| SRR9715743 | Root | 275.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 51.365 |
| SRR8749028 | MeJA induced 9h | 38.102 |
| SRR8749029 | MeJA induced 9h | 31.232 |
| SRR8749030 | Uninduced | 4.612 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 96.243 |
| SRR8400027 | Control - Root | 133.436 |