Gene detail information of Glyur000465s00024387 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38120.1 | 0 | Transmembrane amino acid transporter family protein |
| NR | XP_006602646.1 | 0 | PREDICTED: auxin transporter-like protein 2-like isoform X2 [Glycine max] |
| Swissprot | tr|Q9FEL7|LAX2_MEDTR | 0 | Auxin transporter-like protein 2 |
| trEMBL | tr|I1N2V5|I1N2V5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G42640.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00465 | 77472 | 85833 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000465s00024387.1 | PF01490.13 | Aa_trans | 47 | 440 | 3.60E-81 |
| Glyur000465s00024387.2 | PF01490.13 | Aa_trans | 47 | 440 | 3.60E-81 |
| Glyur000465s00024387.3 | PF01490.13 | Aa_trans | 47 | 440 | 3.00E-81 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.541 |
| SRR1783600 | control | 10.186 |
| SRR1783602 | moderate drought stress | 5.788 |
| SRR1811619 | moderate drought stress | 5.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.164 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.968 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.068 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.900 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.297 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.977 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.269 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.727 |
| SRR2868004 | Drought Stress (root) | 36.783 |
| SRR2967015 | Control (root) | 44.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.267 |
| SRR9715740 | Leaf | 7.494 |
| SRR9715741 | Leaf | 9.957 |
| SRR9715739 | Root | 8.865 |
| SRR9715742 | Root | 38.341 |
| SRR9715743 | Root | 35.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.972 |
| SRR8749028 | MeJA induced 9h | 10.011 |
| SRR8749029 | MeJA induced 9h | 8.932 |
| SRR8749030 | Uninduced | 0.973 |
| SRR8749031 | Uninduced | 0.417 |
| SRR8749032 | Uninduced | 0.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.945 |
| SRR8400027 | Control - Root | 33.321 |