Gene detail

Gene detail information of Glyur000464s00022398

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G47820.2	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	KEH31468.1	0	chromosome-associated kinesin KIF4A-like protein [Medicago truncatula]
Swissprot	tr\|P46869\|FLA10_CHLRE	7.00E-80	Kinesin-like protein FLA10
trEMBL	tr\|A0A072UR07\|A0A072UR07_MEDTR	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000464s00022398.1
ATGGAAACATCGGAGAATTGCTCTGTAAAAGTTGCTCTTCACATTCGTCCCCTCATTGCCGATGAACGACAACAAGGTTGCACTGAATGTGTTTCCGTTACCCCTGGAAAGCCCCAGGTTCAAATTGGTTCACATTTCTTTACATTTGATCATGTTTACGGAAATGGTGGATCCCCATCAGCTGATATGTTTGAGGAATGCGTTGTTCCATTGGTCGATGGCTTATTCCAAGGATTCAATGCTACTGTACTTGCTTATGGTCAGACAGGATCTGGGAAAACATATACCATGGGAACTGGCTACAGTGACAATTGTCGGATTGGGTTAATTCCTCAGGTTATGAATGCCCTGTTCAATAAGATTGAAACACTAAAGCATCAAACGGAATTTCAGTTGCATGTCTCCTTCATTGAGATTTTGAAGGAAGAGGTAAGGGACTTGTTGGATATGGTATCTATGGGCAAATCAGATACCTCTTGTTCTAATGGCCATTCTGGAAAAGTAACTGTTCCTGGGAAGCCACCAATACAAATTCGTGAAACATCAAGTGGAGTAATAACACTGGCAGGGTCAACTGAAGTTGCTGTAAGTACATTACAGGAGATGGCTGCTTACTTGGAGCAGGGTTCTTTAAATAGAGCAACGGGAAGTACAAATATGAACAACCAATCCAGTCGGTCGCATGCCATCTTCACAATTACATTAGAACAGATGCGCAAACTCCATTCAGTTTCTCCCAGCAATGGCACTTTGGATGAGGATATGGGAGAAGAATACCTCTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAGCGAGCTAAAAGAACTGGTTCTGATGGTCTTCGTTTAAAAGAAGGCATACACATCAATAGAGGTCTTCTTGCACTTGGTAATGTCATAAGTGCACTGGGGGATGAGAAAAAGCGAAAGGAGGGTGCACATGTCCCTTATCGGGATAGCAAACTCACTCGACTCTTGCAGAGTTACTGGTCTTTGTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGCCCTGCTGACGTCAATGCTGAGGAAACTCTTAATACCCTCAAGTACGCAAACCGTGCACGCAATATTCAAAATAAGCCTGTTGCCAATCGAGATTTGTTATCCANTGAGATGCAGCAAATGCGCCAGCAGTTAAAGTACTTGCAGGCTGAGCTCTGTTCTCGAGGAGGGGCTCCGACTGATGAACTGCGGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGAAACTAATGAGGACCTCTGTCGAGAACTTCATGAATATCGCAGTAGATGTGGTTTTGTAGAGAGATGTGAAATTGATGAAACAGATGGACATATTTATCTTGTGAAAAATGATGGGCCTGAGGGGCGCTTGCAGAGCTCAGATTCATCTGACCATCCAATGGCTGGCAGTATGTCAGGTGAGGATTCAAGGGAAACTGATGAAGTAGCAAAAGAGTTGGAACATGCAGTATTGCAAAATACCATGGATAAAGAGATGCATGAGTTAAATAAGCGCTTGNAGCAGAAAGAGTCTGAGATGAAGCTTATTGGAGCTGATACTGAAGCACTCAAGCAGCACTTTGGAAAGAAAATTATGGAACTTGAGGAAGAGAAAAGAAAAGTGCAGCAAGAAAGGGACCGTTTGTTGCATGAAGTAGAGAATCTTGCTGTTAATTCAGATGGACTAGCACATAAAAATCAAGATGTTCGTGGACAAAAATTGAAAGCATTGGAAGCACAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAAGCGTCTCGTGAAAAGGAGTTACTCCAGTTGAAAAAGGAGGGAAGAAGGAATGAGTATGAAAGACATAAACTTGAGGCTCTAAACCAGCGCCAAAAAATGGTTCTTCAAAGGAAGACAGAGGAGGCAACAATGGCTACAAAAAGGCTAAAAGAGTTGTTGGAAGCCCGCAAATCTCCNCGTGACAACTCTGTTTATTCAAATGGACATCTACAGCCTGGGCAGGTCAATGAAAAATCCCTCCAGAGGTGGCTTGATCAGGAGCTGGAGGTCATGGTACATGTGCATGATGTTCGTGCTGAATTTGACAAACAAAACCAAGTTCAAGCTGCACTGGAGGAAGAGTTGGCTTTCCTGAAACAAGTGGATCAATTTTCAGATAGGCAGAGTATCCCCTCAGGAAACAGCAGATATTTGAGACTGTTATCCATGTCACCAGATGTAAAAGTTGCAAGAATAGCTTCTCTTGAGAACATGCTGAGCATGTCTTCAGCTGCTTTGAAAGCCATGACTGCACAACTTACTGAGGCAGAAGAAAGGGAACGGACATTAAATAANCGTGGACGTTGGATTCAGTTACGTTCAATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAATGCTACAGCAGAAGCAAGGTGCAAATTGTGGGAAAAGAATATGGAACTAAAGGACTTNAAAGAGCAACTCAATGAGCTTGTAACACTACTACAACAAAGTGAGGCACAGAGGAAAGAACTTGTAAAGGAGAAAGAAATTAGGGAACAAGCTGTTGCCATCACATTGAATACATCAGCATTGGAAAATTCGCGGTCGTTGAAGCACCTTGCGGATGAAATGAGTGGTCCATTGTCCCCAATGTCACTTCCTGCACCAAAGCAACTCAAATTCACCCCTGGAGTTGTTAATGGGTCAGTCAGGGAGTCGCCTGCGTTTCTAGATGAAGCACGAAAGATGATACCCATTGGAGAGTTGTCAACAAAGAGNCTAGCAGCTATAGGACAAGCTGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGCTACAATTTAAATGGAAGTGGCAAAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGATGAAACAATCGTGAGGTCAAGGCCTCGAGCACAAGCTTTGATAACGTGATGTGATGTTGAGCTCAGATAAAGGGACATTATTATCTCTGAATGTTGACCGCTATGTGTTTCAACATGGCTTGACAAAAGTACAGATCATTGCAGGCTTGATGTAAATTGGATGAGTTTCCTGGTATATTTGTCGGGGTATTTTTGCTGAGATACAATTTGGTTGTTGGAGAAAGTTGTCTTGGTTCTCTGTAGGTTGTACACACAATAGGCGTACACTGACCATTGACAATATCAGAGGAAAGAATTAGTTTTAGAAGGTTAAAAAGGAAAGCGTTGCACTCCTGCATATATTTTGAATATATAGCATGTGATGAAGCTGTTCCATGTTGATTCTT

Protein Sequence

>Glyur000464s00022398.1
METSENCSVKVALHIRPLIADERQQGCTECVSVTPGKPQVQIGSHFFTFDHVYGNGGSPSADMFEECVVPLVDGLFQGFNATVLAYGQTGSGKTYTMGTGYSDNCRIGLIPQVMNALFNKIETLKHQTEFQLHVSFIEILKEEVRDLLDMVSMGKSDTSCSNGHSGKVTVPGKPPIQIRETSSGVITLAGSTEVAVSTLQEMAAYLEQGSLNRATGSTNMNNQSSRSHAIFTITLEQMRKLHSVSPSNGTLDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRKEGAHVPYRDSKLTRLLQSYWSLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVANRDLLSXEMQQMRQQLKYLQAELCSRGGAPTDELRVLKERIAWLEETNEDLCRELHEYRSRCGFVERCEIDETDGHIYLVKNDGPEGRLQSSDSSDHPMAGSMSGEDSRETDEVAKELEHAVLQNTMDKEMHELNKRLXQKESEMKLIGADTEALKQHFGKKIMELEEEKRKVQQERDRLLHEVENLAVNSDGLAHKNQDVRGQKLKALEAQVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKMVLQRKTEEATMATKRLKELLEARKSPRDNSVYSNGHLQPGQVNEKSLQRWLDQELEVMVHVHDVRAEFDKQNQVQAALEEELAFLKQVDQFSDRQSIPSGNSRYLRLLSMSPDVKVARIASLENMLSMSSAALKAMTAQLTEAEERERTLNXRGRWIQLRSMGDAKNVLQYLFNATAEARCKLWEKNMELKDXKEQLNELVTLLQQSEAQRKELVKEKEIREQAVAITLNTSALENSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNGSVRESPAFLDEARKMIPIGELSTKXLAAIGQAGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIVRSRPRAQALIT

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00464	80021	92732	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000464s00022398.1	PF00225.18	Kinesin	16	374	8.40E-98

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.759
SRR1783600	control	2.739
SRR1783602	moderate drought stress	2.567
SRR1811619	moderate drought stress	2.496

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.899
DRR006520	Root Summer glycyrrhizin high producing strain	3.914
DRR006521	Root Winter glycyrrhizin high producing strain	1.923
DRR006522	Root Winter glycyrrhizin high producing strain	1.629
DRR006523	Root Summer glycyrrhizin low producing strain	6.577
DRR006524	Root Summer glycyrrhizin low producing strain	6.357
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.939
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.009

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.843
SRR2868004	Drought Stress (root)	11.635
SRR2967015	Control (root)	11.766

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.451
SRR9715740	Leaf	4.722
SRR9715741	Leaf	6.633
SRR9715739	Root	0.582
SRR9715742	Root	3.312
SRR9715743	Root	2.506

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.233
SRR8749028	MeJA induced 9h	5.051
SRR8749029	MeJA induced 9h	4.126
SRR8749030	Uninduced	1.031
SRR8749031	Uninduced	1.892
SRR8749032	Uninduced	1.138

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.097
SRR8400027	Control - Root	16.830