Gene detail information of Glyur000464s00022396.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23340.1 | 1.00E-40 | DREB and EAR motif protein 3 |
| NR | XP_003551002.1 | 3.89E-74 | PREDICTED: ethylene-responsive transcription factor ERF008-like [Glycine max] |
| Swissprot | tr|O22174|ERF08_ARATH | 2.00E-54 | Ethylene-responsive transcription factor ERF008 |
| trEMBL | tr|I1MVU7|I1MVU7_SOYBN | 1.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G18580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00464 | 52662 | 53123 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
| EAR motif-containing Proteins | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000464s00022396.1 | PF00847.15 | AP2 | 23 | 73 | 1.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.830 |
| SRR1783600 | control | 34.173 |
| SRR1783602 | moderate drought stress | 62.364 |
| SRR1811619 | moderate drought stress | 61.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.646 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.056 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 80.120 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 80.319 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.071 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.155 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.105 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.544 |
| SRR2868004 | Drought Stress (root) | 37.915 |
| SRR2967015 | Control (root) | 55.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.113 |
| SRR9715740 | Leaf | 12.117 |
| SRR9715741 | Leaf | 12.104 |
| SRR9715739 | Root | 115.389 |
| SRR9715742 | Root | 66.463 |
| SRR9715743 | Root | 55.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.022 |
| SRR8749028 | MeJA induced 9h | 4.582 |
| SRR8749029 | MeJA induced 9h | 1.933 |
| SRR8749030 | Uninduced | 0.905 |
| SRR8749031 | Uninduced | 1.313 |
| SRR8749032 | Uninduced | 4.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.827 |
| SRR8400027 | Control - Root | 66.187 |