Gene detail information of Glyur000463s00026775 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11390.1 | 1.00E-101 | WPP domain-interacting protein 1 |
| NR | XP_003543896.1 | 0 | PREDICTED: WPP domain-interacting tail-anchored protein 1-like isoform X1 [Glycine max] |
| Swissprot | tr|Q8L7E5|WIT1_ARATH | 3.00E-122 | WPP domain-interacting tail-anchored protein 1 |
| trEMBL | tr|K7LXQ5|K7LXQ5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G06950.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00463 | 87440 | 90090 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.381 |
| SRR1783600 | control | 7.376 |
| SRR1783602 | moderate drought stress | 4.078 |
| SRR1811619 | moderate drought stress | 4.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.611 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.939 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.978 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.231 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.771 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.624 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.138 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.375 |
| SRR2868004 | Drought Stress (root) | 8.169 |
| SRR2967015 | Control (root) | 7.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.835 |
| SRR9715740 | Leaf | 5.534 |
| SRR9715741 | Leaf | 3.833 |
| SRR9715739 | Root | 0.714 |
| SRR9715742 | Root | 1.691 |
| SRR9715743 | Root | 1.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.101 |
| SRR8749028 | MeJA induced 9h | 0.507 |
| SRR8749029 | MeJA induced 9h | 0.063 |
| SRR8749030 | Uninduced | 0.099 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.657 |
| SRR8400027 | Control - Root | 17.583 |