Gene detail information of Glyur000463s00026771 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09140.1 | 3.00E-12 | Protein of unknown function (DUF674) |
| NR | XP_004497341.1 | 3.93E-60 | PREDICTED: uncharacterized protein LOC101505540 [Cicer arietinum] |
| trEMBL | tr|A0A072W2M3|A0A072W2M3_MEDTR | 2.00E-59 | DUF674 family protein {ECO:0000313|EMBL:KEH44490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00463 | 50672 | 51367 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000463s00026771.1 | PF05056.7 | DUF674 | 3 | 226 | 2.40E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.612 |
| SRR1783600 | control | 5.016 |
| SRR1783602 | moderate drought stress | 5.511 |
| SRR1811619 | moderate drought stress | 5.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.281 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.185 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.286 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.269 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.516 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.103 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.134 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.370 |
| SRR2868004 | Drought Stress (root) | 1.515 |
| SRR2967015 | Control (root) | 1.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.110 |
| SRR9715740 | Leaf | 0.197 |
| SRR9715741 | Leaf | 0.097 |
| SRR9715739 | Root | 6.082 |
| SRR9715742 | Root | 9.469 |
| SRR9715743 | Root | 8.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.506 |
| SRR8749028 | MeJA induced 9h | 0.809 |
| SRR8749029 | MeJA induced 9h | 0.074 |
| SRR8749030 | Uninduced | 0.099 |
| SRR8749031 | Uninduced | 0.096 |
| SRR8749032 | Uninduced | 0.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.521 |
| SRR8400027 | Control - Root | 18.894 |