Gene detail information of Glyur000463s00026769 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38820.1 | 5.00E-128 | Transmembrane amino acid transporter family protein |
| NR | XP_006603940.1 | 0 | PREDICTED: sodium-coupled neutral amino acid transporter 1-like isoform X1 [Glycine max] |
| trEMBL | tr|K7MWE5|K7MWE5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G04990.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00463 | 36472 | 42009 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000463s00026769.1 | PF01490.13 | Aa_trans | 26 | 432 | 3.50E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.612 |
| SRR1783600 | control | 2.619 |
| SRR1783602 | moderate drought stress | 1.207 |
| SRR1811619 | moderate drought stress | 1.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.723 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.673 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.496 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.483 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.459 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.030 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.349 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.256 |
| SRR2868004 | Drought Stress (root) | 8.883 |
| SRR2967015 | Control (root) | 8.544 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.824 |
| SRR9715740 | Leaf | 17.758 |
| SRR9715741 | Leaf | 12.579 |
| SRR9715739 | Root | 1.947 |
| SRR9715742 | Root | 0.649 |
| SRR9715743 | Root | 0.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.120 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.036 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.066 |
| SRR8749032 | Uninduced | 0.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.942 |
| SRR8400027 | Control - Root | 5.985 |