Gene detail information of Glyur000462s00025045 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01170.1 | 1.00E-61 | Ribosomal protein L34e superfamily protein |
| NR | AFK36914.1 | 1.57E-133 | unknown [Lotus japonicus] |
| Swissprot | tr|P0C8Q9|Y5902_ARATH | 9.00E-23 | Uncharacterized protein At5g19025 |
| trEMBL | tr|I3S9H2|I3S9H2_LOTJA | 6.00E-134 | Uncharacterized protein {ECO:0000313|EMBL:AFK36914.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00462 | 28783 | 29457 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.906 |
| SRR1783600 | control | 9.953 |
| SRR1783602 | moderate drought stress | 6.054 |
| SRR1811619 | moderate drought stress | 6.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.677 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.280 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.427 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.058 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.306 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.610 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.606 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.148 |
| SRR2868004 | Drought Stress (root) | 41.539 |
| SRR2967015 | Control (root) | 36.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.742 |
| SRR9715740 | Leaf | 36.961 |
| SRR9715741 | Leaf | 31.439 |
| SRR9715739 | Root | 29.625 |
| SRR9715742 | Root | 31.053 |
| SRR9715743 | Root | 37.258 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 96.278 |
| SRR8749028 | MeJA induced 9h | 134.021 |
| SRR8749029 | MeJA induced 9h | 147.082 |
| SRR8749030 | Uninduced | 165.430 |
| SRR8749031 | Uninduced | 149.878 |
| SRR8749032 | Uninduced | 142.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.144 |
| SRR8400027 | Control - Root | 31.590 |