Gene detail information of Glyur000461s00027806 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G44020.1 | 1.00E-18 | thylakoid lumenal P17.1 protein |
| NR | XP_007141611.1 | 1.19E-37 | hypothetical protein PHAVU_008G210600g [Phaseolus vulgaris] |
| trEMBL | tr|V7B7P6|V7B7P6_PHAVU | 4.00E-38 | Uncharacterized protein {ECO:0000313|EMBL:ESW13605.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00461 | 152523 | 155438 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.809 |
| SRR1783600 | control | 0.722 |
| SRR1783602 | moderate drought stress | 1.058 |
| SRR1811619 | moderate drought stress | 1.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.842 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.397 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.181 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.112 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.765 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.574 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.855 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.377 |
| SRR2868004 | Drought Stress (root) | 1.328 |
| SRR2967015 | Control (root) | 1.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.897 |
| SRR9715740 | Leaf | 43.525 |
| SRR9715741 | Leaf | 21.512 |
| SRR9715739 | Root | 0.275 |
| SRR9715742 | Root | 0.017 |
| SRR9715743 | Root | 0.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.581 |
| SRR8749028 | MeJA induced 9h | 1.074 |
| SRR8749029 | MeJA induced 9h | 1.407 |
| SRR8749030 | Uninduced | 0.249 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.801 |
| SRR8400027 | Control - Root | 4.191 |