Gene detail information of Glyur000460s00029335 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24260.1 | 2.00E-33 | LJRHL1-like 1 |
| NR | XP_007138416.1 | 3.10E-128 | hypothetical protein PHAVU_009G207000g [Phaseolus vulgaris] |
| Swissprot | tr|Q9ZUG9|BH066_ARATH | 3.00E-53 | Transcription factor bHLH66 |
| trEMBL | tr|V7AYL9|V7AYL9_PHAVU | 1.00E-128 | Uncharacterized protein {ECO:0000313|EMBL:ESW10410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00460 | 19139 | 23288 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.068 |
| SRR1783600 | control | 28.241 |
| SRR1783602 | moderate drought stress | 19.073 |
| SRR1811619 | moderate drought stress | 18.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.941 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.719 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 40.513 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 40.877 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.610 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.355 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.349 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.408 |
| SRR2868004 | Drought Stress (root) | 36.581 |
| SRR2967015 | Control (root) | 36.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.544 |
| SRR9715740 | Leaf | 4.654 |
| SRR9715741 | Leaf | 17.922 |
| SRR9715739 | Root | 6.344 |
| SRR9715742 | Root | 19.912 |
| SRR9715743 | Root | 17.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 127.544 |
| SRR8749028 | MeJA induced 9h | 84.665 |
| SRR8749029 | MeJA induced 9h | 104.533 |
| SRR8749030 | Uninduced | 16.006 |
| SRR8749031 | Uninduced | 7.778 |
| SRR8749032 | Uninduced | 14.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.631 |
| SRR8400027 | Control - Root | 19.085 |