Gene detail information of Glyur000459s00027589 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G45550.1 | 2.00E-113 | Mob1/phocein family protein |
| NR | ACJ86271.1 | 3.58E-158 | unknown [Medicago truncatula] |
| Swissprot | tr|Q8GYX0|MOB1_ARATH | 2.00E-143 | MOB kinase activator-like 1 |
| trEMBL | tr|B7FND8|B7FND8_MEDTR | 1.00E-158 | Uncharacterized protein {ECO:0000313|EMBL:AFK33377.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00459 | 132468 | 137007 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000459s00027589.1 | PF03637.12 | Mob1_phocein | 30 | 205 | 4.00E-74 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 51.645 |
| SRR1783600 | control | 52.104 |
| SRR1783602 | moderate drought stress | 75.574 |
| SRR1811619 | moderate drought stress | 74.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.796 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.944 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 80.365 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 77.874 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.634 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.264 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 47.393 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 47.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 44.802 |
| SRR2868004 | Drought Stress (root) | 48.105 |
| SRR2967015 | Control (root) | 46.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.810 |
| SRR9715740 | Leaf | 53.987 |
| SRR9715741 | Leaf | 62.014 |
| SRR9715739 | Root | 12.780 |
| SRR9715742 | Root | 16.369 |
| SRR9715743 | Root | 16.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 137.576 |
| SRR8749028 | MeJA induced 9h | 117.903 |
| SRR8749029 | MeJA induced 9h | 176.661 |
| SRR8749030 | Uninduced | 284.332 |
| SRR8749031 | Uninduced | 232.904 |
| SRR8749032 | Uninduced | 267.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.842 |
| SRR8400027 | Control - Root | 48.087 |