Gene detail information of Glyur000459s00027586 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G35560.1 | 0 | DENN (AEX-3) domain-containing protein |
| NR | XP_004513477.1 | 0 | PREDICTED: uncharacterized protein LOC101492505 isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072VHD3|A0A072VHD3_MEDTR | 0 | DENN (AEX-3) domain protein {ECO:0000313|EMBL:KEH37565.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00459 | 64973 | 87045 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000459s00027586.1 | PF03456.13 | uDENN | 206 | 284 | 7.00E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.692 |
| SRR1783600 | control | 6.676 |
| SRR1783602 | moderate drought stress | 11.255 |
| SRR1811619 | moderate drought stress | 11.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.861 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.820 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.888 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.768 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.056 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.278 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.793 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.124 |
| SRR2868004 | Drought Stress (root) | 37.827 |
| SRR2967015 | Control (root) | 37.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.727 |
| SRR9715740 | Leaf | 21.527 |
| SRR9715741 | Leaf | 33.048 |
| SRR9715739 | Root | 2.752 |
| SRR9715742 | Root | 17.671 |
| SRR9715743 | Root | 15.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.902 |
| SRR8749028 | MeJA induced 9h | 32.485 |
| SRR8749029 | MeJA induced 9h | 30.912 |
| SRR8749030 | Uninduced | 60.031 |
| SRR8749031 | Uninduced | 108.832 |
| SRR8749032 | Uninduced | 58.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.160 |
| SRR8400027 | Control - Root | 19.259 |