Gene detail information of Glyur000456s00017933 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53440.1 | 1.00E-78 | |
| NR | KHN44215.1 | 0 | hypothetical protein glysoja_024435 [Glycine soja] |
| trEMBL | tr|I1JYT1|I1JYT1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G41520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00456 | 129550 | 135853 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.324 |
| SRR1783600 | control | 11.327 |
| SRR1783602 | moderate drought stress | 28.040 |
| SRR1811619 | moderate drought stress | 27.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.385 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.162 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.717 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.723 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.361 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.471 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.855 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.471 |
| SRR2868004 | Drought Stress (root) | 21.870 |
| SRR2967015 | Control (root) | 30.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.812 |
| SRR9715740 | Leaf | 8.192 |
| SRR9715741 | Leaf | 7.519 |
| SRR9715739 | Root | 3.715 |
| SRR9715742 | Root | 14.536 |
| SRR9715743 | Root | 13.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.615 |
| SRR8749028 | MeJA induced 9h | 16.864 |
| SRR8749029 | MeJA induced 9h | 7.120 |
| SRR8749030 | Uninduced | 5.405 |
| SRR8749031 | Uninduced | 3.567 |
| SRR8749032 | Uninduced | 5.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.687 |
| SRR8400027 | Control - Root | 24.550 |