Gene detail information of Glyur000455s00015987 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01350.1 | 2.00E-12 | |
| NR | XP_003547858.1 | 8.58E-37 | PREDICTED: uncharacterized protein LOC100799811 [Glycine max] |
| trEMBL | tr|C6TCA5|C6TCA5_SOYBN | 3.00E-37 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G19270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00455 | 89098 | 91978 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 47.221 |
| SRR1783600 | control | 47.294 |
| SRR1783602 | moderate drought stress | 46.925 |
| SRR1811619 | moderate drought stress | 46.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 51.415 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 51.472 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 113.433 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 108.999 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 61.277 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 61.096 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.419 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.660 |
| SRR2868004 | Drought Stress (root) | 57.827 |
| SRR2967015 | Control (root) | 50.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 43.125 |
| SRR9715740 | Leaf | 66.349 |
| SRR9715741 | Leaf | 54.134 |
| SRR9715739 | Root | 13.830 |
| SRR9715742 | Root | 22.408 |
| SRR9715743 | Root | 19.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 87.697 |
| SRR8749028 | MeJA induced 9h | 58.041 |
| SRR8749029 | MeJA induced 9h | 94.403 |
| SRR8749030 | Uninduced | 125.329 |
| SRR8749031 | Uninduced | 159.788 |
| SRR8749032 | Uninduced | 119.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 61.425 |
| SRR8400027 | Control - Root | 59.611 |