Gene detail information of Glyur000455s00015976 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003552255.1 | 1.18E-116 | PREDICTED: uncharacterized protein LOC100775965 [Glycine max] |
| trEMBL | tr|I1N2Y6|I1N2Y6_SOYBN | 4.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G43200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00455 | 18257 | 19919 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000455s00015976.1 | PF14383.1 | VARLMGL | 69 | 85 | 5.50E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.121 |
| SRR1783600 | control | 0.132 |
| SRR1783602 | moderate drought stress | 0.387 |
| SRR1811619 | moderate drought stress | 0.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.097 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.096 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.755 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.150 |
| SRR2868004 | Drought Stress (root) | 0.179 |
| SRR2967015 | Control (root) | 0.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.748 |
| SRR9715740 | Leaf | 5.324 |
| SRR9715741 | Leaf | 11.805 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.167 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.478 |
| SRR8749028 | MeJA induced 9h | 0.182 |
| SRR8749029 | MeJA induced 9h | 0.054 |
| SRR8749030 | Uninduced | 0.058 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.663 |
| SRR8400027 | Control - Root | 0.031 |