Gene detail information of Glyur000453s00023822 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80690.1 | 5.00E-76 | PPPDE putative thiol peptidase family protein |
| NR | XP_004515519.1 | 1.07E-121 | PREDICTED: deSI-like protein At4g17486-like [Cicer arietinum] |
| Swissprot | tr|Q93VG8|PPDEX_ARATH | 1.00E-60 | DeSI-like protein At4g17486 |
| trEMBL | tr|I1KVJ5|I1KVJ5_SOYBN | 1.00E-121 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G23180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00453 | 106162 | 109133 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000453s00023822.1 | PF05903.9 | Peptidase_C97 | 17 | 148 | 1.50E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.042 |
| SRR1783600 | control | 8.176 |
| SRR1783602 | moderate drought stress | 7.207 |
| SRR1811619 | moderate drought stress | 7.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.744 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.984 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.296 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.194 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.039 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.076 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.237 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.414 |
| SRR2868004 | Drought Stress (root) | 18.073 |
| SRR2967015 | Control (root) | 21.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.440 |
| SRR9715740 | Leaf | 2.056 |
| SRR9715741 | Leaf | 1.532 |
| SRR9715739 | Root | 6.231 |
| SRR9715742 | Root | 5.999 |
| SRR9715743 | Root | 6.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.249 |
| SRR8749028 | MeJA induced 9h | 0.651 |
| SRR8749029 | MeJA induced 9h | 0.872 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.087 |
| SRR8400027 | Control - Root | 28.785 |