Gene detail information of Glyur000453s00023820 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25190.1 | 6.00E-23 | Integrase-type DNA-binding superfamily protein |
| NR | XP_007135799.1 | 4.36E-79 | hypothetical protein PHAVU_010G159500g [Phaseolus vulgaris] |
| Swissprot | tr|Q94AW5|ERF03_ARATH | 4.00E-55 | Ethylene-responsive transcription factor ERF003 |
| trEMBL | tr|V7AT70|V7AT70_PHAVU | 2.00E-79 | Uncharacterized protein {ECO:0000313|EMBL:ESW07793.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00453 | 81091 | 82196 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.120 |
| SRR1783600 | control | 2.007 |
| SRR1783602 | moderate drought stress | 1.395 |
| SRR1811619 | moderate drought stress | 1.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.988 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.602 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.189 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.282 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.573 |
| SRR2868004 | Drought Stress (root) | 0.995 |
| SRR2967015 | Control (root) | 1.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.061 |
| SRR9715739 | Root | 0.587 |
| SRR9715742 | Root | 0.691 |
| SRR9715743 | Root | 0.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.447 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.204 |
| SRR8400027 | Control - Root | 2.523 |