Gene detail information of Glyur000451s00016534 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20010.2 | 0 | Protein of unknown function (DUF810) |
| NR | KHN16964.1 | 0 | hypothetical protein glysoja_035815 [Glycine soja] |
| trEMBL | tr|G7IE83|G7IE83_MEDTR | 0 | DUF810 family protein {ECO:0000313|EMBL:AES62968.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00451 | 149680 | 155290 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000451s00016534.1 | PF05664.6 | DUF810 | 20 | 715 | 2.80E-250 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.271 |
| SRR1783600 | control | 5.356 |
| SRR1783602 | moderate drought stress | 7.611 |
| SRR1811619 | moderate drought stress | 7.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.075 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.996 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.323 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.933 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.677 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.464 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.620 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.606 |
| SRR2868004 | Drought Stress (root) | 22.418 |
| SRR2967015 | Control (root) | 22.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.875 |
| SRR9715740 | Leaf | 13.024 |
| SRR9715741 | Leaf | 10.572 |
| SRR9715739 | Root | 7.454 |
| SRR9715742 | Root | 12.485 |
| SRR9715743 | Root | 11.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.375 |
| SRR8749028 | MeJA induced 9h | 28.112 |
| SRR8749029 | MeJA induced 9h | 28.098 |
| SRR8749030 | Uninduced | 22.107 |
| SRR8749031 | Uninduced | 26.585 |
| SRR8749032 | Uninduced | 21.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.856 |
| SRR8400027 | Control - Root | 14.339 |