Gene detail information of Glyur000451s00016530 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52140.1 | 3.00E-22 | |
| NR | KEH27184.1 | 1.01E-69 | Avr9/Cf-9 rapidly elicited protein [Medicago truncatula] |
| trEMBL | tr|A0A072UBJ6|A0A072UBJ6_MEDTR | 4.00E-70 | Avr9/Cf-9 rapidly elicited protein {ECO:0000313|EMBL:KEH27184.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00451 | 119139 | 120337 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.112 |
| SRR1783600 | control | 41.036 |
| SRR1783602 | moderate drought stress | 40.806 |
| SRR1811619 | moderate drought stress | 39.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.580 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.949 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.096 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.788 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.951 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.016 |
| SRR2868004 | Drought Stress (root) | 150.741 |
| SRR2967015 | Control (root) | 67.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.328 |
| SRR9715740 | Leaf | 20.854 |
| SRR9715741 | Leaf | 10.085 |
| SRR9715739 | Root | 13.190 |
| SRR9715742 | Root | 37.016 |
| SRR9715743 | Root | 33.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.109 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 73.039 |
| SRR8400027 | Control - Root | 40.936 |