Gene detail information of Glyur000451s00016519 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15450.1 | 5.00E-98 | Senescence/dehydration-associated protein-related |
| NR | KHN16973.1 | 0 | hypothetical protein glysoja_035824 [Glycine soja] |
| trEMBL | tr|I1MM12|I1MM12_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G08490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00451 | 38471 | 42507 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000451s00016519.1 | PF06911.7 | Senescence | 176 | 361 | 1.20E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.973 |
| SRR1783600 | control | 2.035 |
| SRR1783602 | moderate drought stress | 2.279 |
| SRR1811619 | moderate drought stress | 2.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.024 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.014 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.297 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.310 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.043 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.781 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.380 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.870 |
| SRR2868004 | Drought Stress (root) | 20.112 |
| SRR2967015 | Control (root) | 30.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.989 |
| SRR9715740 | Leaf | 11.718 |
| SRR9715741 | Leaf | 5.670 |
| SRR9715739 | Root | 1.305 |
| SRR9715742 | Root | 6.508 |
| SRR9715743 | Root | 5.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 1.128 |
| SRR8749031 | Uninduced | 0.056 |
| SRR8749032 | Uninduced | 0.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.876 |
| SRR8400027 | Control - Root | 9.404 |