Gene detail information of Glyur000450s00024054 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32220.1 | 8.00E-52 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | XP_007158250.1 | 1.55E-95 | hypothetical protein PHAVU_002G136800g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FVR6|Y1222_ARATH | 1.00E-83 | Uncharacterized protein At1g32220, chloroplastic (Precursor) |
| trEMBL | tr|I1J4R0|I1J4R0_SOYBN | 3.00E-96 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G01830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00450 | 80455 | 83725 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.636 |
| SRR1783600 | control | 6.553 |
| SRR1783602 | moderate drought stress | 5.087 |
| SRR1811619 | moderate drought stress | 4.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.171 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.836 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.167 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.086 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.902 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.944 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 42.004 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 41.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.027 |
| SRR2868004 | Drought Stress (root) | 14.698 |
| SRR2967015 | Control (root) | 9.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.065 |
| SRR9715740 | Leaf | 52.895 |
| SRR9715741 | Leaf | 39.406 |
| SRR9715739 | Root | 1.700 |
| SRR9715742 | Root | 4.573 |
| SRR9715743 | Root | 4.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.866 |
| SRR8749028 | MeJA induced 9h | 7.081 |
| SRR8749029 | MeJA induced 9h | 6.182 |
| SRR8749030 | Uninduced | 6.025 |
| SRR8749031 | Uninduced | 2.107 |
| SRR8749032 | Uninduced | 3.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.210 |
| SRR8400027 | Control - Root | 12.327 |