Gene detail information of Glyur000449s00027100 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10080.1 | 7.00E-150 | Eukaryotic aspartyl protease family protein |
| NR | XP_003552102.1 | 0 | PREDICTED: aspartic proteinase-like protein 1-like [Glycine max] |
| Swissprot | tr|Q9LX20|ASPL1_ARATH | 0 | Aspartic proteinase-like protein 1 (Precursor) |
| trEMBL | tr|I1MYU8|I1MYU8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G02280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00449 | 80983 | 85408 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000449s00027100.1 | PF14543.1 | TAXi_N | 106 | 291 | 1.10E-28 |
| Glyur000449s00027100.1 | PF14541.1 | TAXi_C | 359 | 432 | 8.10E-07 |
| Glyur000449s00027100.2 | PF14543.1 | TAXi_N | 106 | 291 | 1.20E-28 |
| Glyur000449s00027100.2 | PF14541.1 | TAXi_C | 359 | 432 | 8.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.337 |
| SRR1783600 | control | 22.577 |
| SRR1783602 | moderate drought stress | 14.828 |
| SRR1811619 | moderate drought stress | 14.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.899 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.866 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.042 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.779 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.144 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.913 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.474 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.685 |
| SRR2868004 | Drought Stress (root) | 11.229 |
| SRR2967015 | Control (root) | 13.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.259 |
| SRR9715740 | Leaf | 5.156 |
| SRR9715741 | Leaf | 5.028 |
| SRR9715739 | Root | 8.607 |
| SRR9715742 | Root | 12.964 |
| SRR9715743 | Root | 12.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.473 |
| SRR8749028 | MeJA induced 9h | 6.607 |
| SRR8749029 | MeJA induced 9h | 3.850 |
| SRR8749030 | Uninduced | 0.626 |
| SRR8749031 | Uninduced | 0.187 |
| SRR8749032 | Uninduced | 0.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.319 |
| SRR8400027 | Control - Root | 35.910 |