Gene detail information of Glyur000449s00027093 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78020.1 | 2.00E-17 | Protein of unknown function (DUF581) |
| NR | XP_003601999.1 | 1.23E-57 | hypothetical protein MTR_3g087700 [Medicago truncatula] |
| trEMBL | tr|G7J4C7|G7J4C7_MEDTR | 5.00E-58 | Uncharacterized protein {ECO:0000313|EMBL:AFK35802.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00449 | 8763 | 10266 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000449s00027093.1 | PF04570.9 | DUF581 | 107 | 160 | 5.50E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 108.707 |
| SRR1783600 | control | 108.330 |
| SRR1783602 | moderate drought stress | 74.350 |
| SRR1811619 | moderate drought stress | 73.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 79.605 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 82.369 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.514 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.753 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.239 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 62.335 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 108.734 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 109.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 66.817 |
| SRR2868004 | Drought Stress (root) | 71.218 |
| SRR2967015 | Control (root) | 58.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.826 |
| SRR9715740 | Leaf | 28.561 |
| SRR9715741 | Leaf | 27.292 |
| SRR9715739 | Root | 39.148 |
| SRR9715742 | Root | 42.074 |
| SRR9715743 | Root | 44.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.396 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 82.859 |
| SRR8400027 | Control - Root | 76.287 |