Gene detail information of Glyur000448s00026720 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003638071.1 | 4.11E-119 | Ripening-related protein grip22 [Medicago truncatula] |
| Swissprot | tr|P84527|KIWEL_ACTDE | 3.00E-99 | KiTH-2 |
| trEMBL | tr|G8A171|G8A171_MEDTR | 2.00E-119 | Ripening-related protein grip22 {ECO:0000313|EMBL:AES85209.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00448 | 139637 | 140865 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.563 |
| SRR1783600 | control | 9.590 |
| SRR1783602 | moderate drought stress | 1.600 |
| SRR1811619 | moderate drought stress | 1.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.305 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.248 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.743 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.702 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.698 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.525 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 434.390 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 432.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.369 |
| SRR2868004 | Drought Stress (root) | 2.635 |
| SRR2967015 | Control (root) | 2.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 96.258 |
| SRR9715740 | Leaf | 32.579 |
| SRR9715741 | Leaf | 91.028 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.178 |
| SRR9715743 | Root | 2.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.724 |
| SRR8749028 | MeJA induced 9h | 1.894 |
| SRR8749029 | MeJA induced 9h | 1.713 |
| SRR8749030 | Uninduced | 2.454 |
| SRR8749031 | Uninduced | 1.612 |
| SRR8749032 | Uninduced | 3.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.788 |
| SRR8400027 | Control - Root | 1.702 |