Gene detail

Gene detail information of Glyur000448s00026719

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G27990.1	7.00E-63	BEL1-like homeodomain 8
NR	XP_007150172.1	0	hypothetical protein PHAVU_005G132700g [Phaseolus vulgaris]
Swissprot	tr\|Q9SJJ3\|BLH8_ARATH	9.00E-82	BEL1-like homeodomain protein 8
trEMBL	tr\|V7BZW7\|V7BZW7_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW22166.1}

Sequence

Transcript Sequence

>Glyur000448s00026719.1
GGGAAATGGAAGGAGCGGATGGTCGATGGTGGAAGGAGAGGAGAAGAGAGAGAGGGCCCCAACCACACATGTGTTGAATGTTGAGGACAGCTCCCCATTTTGCGGGTGCTCTCTCGCGTTCGCGTCGCTCTTCGGATATTTAACTTTTTAACTGCCACTTTACGTTAAATTCAAACGTCAAAGCTAACGGCCGCGCAAGATTGTGGTATTTGAGGATGGTGGAGGTGCGAGCGAGCGAGCGAGGTTAATTGGTAGTACGTACAATTGGTATAGTGTAGTCAAGCGTGGTGTATGTAGCAATAGCATCTTCAAATCAAACTCATGATCTGAAATCCTCACCCCGGAATTCGGTGTCTCCATCTCCAAGTTGCAACACAGCTACTACAGCGTTCACTTTCACCACCATAATATTGGATGGAGCTGCTTTGGTTTGGAGTGAGTGAAGCATTGATACTTTGGGTATTTGGTAGGGGAGGAGCATTATTTGAATTTGAATTTTGTTACAGTGAGATGAAGGTTGTGACTTGTAAGAAAATTGAGAAAGGAAACACGAACAAGTAGCTTTATTTCAGCCCTGTGCAAGGAGAGCAATTTTTTGGAAGGCTTTAATTAGAGGCTTTGCTGGGTTGGAATGAATAGCTTAAGGCCTGAGTCTGATGTAGCACATCAAATTCGGCGTGATAAGTTGAGAATCCATAACAGTAGTAGTAGTTCCCTGCAGCATTTTCAGGAATTCCCCAACAATAATCTGGAACAGTACTTGTCCTTACACCCAGAGTTCAACCTGGATCTTCTTCAAGTTAGGAGCGTTAGAAATGCCAATAACATTATGCAGATCGATGATCACCCACCTCTTTATTCATCATCAGAAATGCCCAACTTTTCAACCCAGAATAATCCTTTGCCTGCTCCAAGGAACGCGTTGGAGTATCAGGAAGTAGGTGCAGCAGAACCGAGTAGGTTATTAATGATACATCAGCAGTACCAGTATGGTTCATTTCCCCATACCTTTCTTTCTCCCCAAAAAGAACAGTGTGAAGAACTGCGTGATCTGGGAAATTGGAGGAACAGTACTGGCCCCCATCAAGTCAGTGATTGGATTGTAAATTATGGAAGCAACAACACCAACCCTTCATTGGCTAATGAGCTCAACAATGTAGGTACTTACCATCACAATGAGAAGCATAGTCACAATGAACAGTTTGGCAATGCATATGGTGAATTAGGTGTAATGCATCATACTCCAGTACTGTATCAGAATGCTTTGCAGGATATTGTCAAGTCTGCTTCTATCAGTGGCCATGGCAATTGGGTAGGGGATGCTACTGCTACTGAGCTTGAACTTCAGCCAAGCCATGAAAATCAGCCAATGAATCAGTTGCGTTTTGGGTGGAAAAATCGAAGTGATTCTTCAAACCCCCAGAGCTTGTCCTTATCACTTTCATCCAATGCGCAATCCAAGGTTTGTGTTTCTCAGTTTGAAGAGGGGTCTGCATCAGATCAGGACCTTCAATGTCTGAAGCATATGAAATCTTTCATGAAACCGTCCATCATTTCTAGAGGTTGTGATGGGAAATCACTTCAAGACATTGTGGGAATAATGCCTTATTCNAAGAGTACATGTTATCGAAATGTGGGTCCCCTTGGCCCTTTCACTGGGTATGCTACTATTCTCAAAAGTTCAAGATTTTTAAAGACTTGCCAACAGTTGTTNGATGAGTTCTGCTGTATATCTGGTCCAAAACTTGCGAAAACATGTGATATTTCAGAGAGGGTAGTCTCTCGAGAAGTTAGTATTGCTTCTACCTCTGCTTCTGCTGCTGATACTGTTACTGTCAATGAAACTGGGGTTGCTTCAAGAGGTAATAATTCGTGTTCTTCATCATCTATGTTGTATATTTCAAANGAGAATAGTGCTGATTGGGGGGCCGGAAGTAGCCATGGCGGTGTTTCTTTGCAGCCAGATTATCAACAGAAGAAAGCAAAGCTCCTGTACATGCAAGAGGAGGTAACCAGGCGATACAAGCAGTACCATCAACAAATGCAAATGGTTGTTTCATCCTTTGAATCAGTATCAGGTCTTAGTTCAGCTACTCCTTACATCTCCTTGGCTCTGAAGTCGGTGTCAAAACACTTCAGGTGCCTAAACAATTCTATCTCGGGTCAGCTCAATCTCATAAGTGAAGTCTTGGGAGAGGATTTGTCAATACCCAACACCAGTACTAGTAGTAAAGTTGACACTAATATGGCAAGGCTAAGGGGAATGGACCAAAGCTTTCAAAAGAACAAACCTTGCAGGGGTAGTACAACAGGTCTTCTTGNCCCGCAACAGCACGTGTGGAGGCCCCAGAGAGGCTTCCCAGAACGTTCAGTGGCAATTCTCAGAGCTTGGTTATTTGCACATTTTCTTCATCCGTACCCCACAGACACTGATAAACACATGTTGGCTACTCAAACAGGGCTTTCACGGAACCAGGTATCAAATTGGTTTATCAATGCTCGAGTTCGCGTGTGGAAGCCCATGGTTGAAGAAATACACACGCTTGAGACAAAAACACCAGGTGCTGCCAATGAGGGAACTTCTGGCACTGAAGGTGGTTCCAGCCAGCCTAGAGTGGATAAGCNTCTAAGCAAGTTTGGCATAATGCATTCAATACCTGAAAAACAATTTCAGGGTATGGAACTGGGGTCATCCATAGATGCCAATAGTTCAGCAGAGGAAAGCAAGTTAANTTCAGAACAATGGAGTCAAGAGAAGCGGTCTAAATTGGAATGCCAAATGACTCCAACAAGCATGGATGGGACTCTGATGGGTTTTCTGCCATACCGACGTGGTGGAATTGAGGGACTTGGGTCTGTATCATTGACATTGGGTCTCAGGCATGGTGTTGAAAGTGTACAACACCACCAACAACAGCAGCTACAAGAGGAGCAACTTAGACATCACCTTGGAGGGCAAATGATGATCCATGACTTTGTAGGCTGATAATTAACACGCTAGCTGATTGTAATGGGAATAGGAGGGAAAAAGAAAATGTTCAAACTTTGGCAGATACAATTAAGCAGTTCCTATTATTTGCTTGGGATTGAAGGGTGGAAAGTATGGGTGGCCAAATGTTCAAACTTTGGCAGATACAATTAAGCAGTTCCACAAGGGCATTGCTAGCAGCCTCGATTAATTGTGTTGTGAGGACACTTTGAAAAAGATGGGGTACGCAGAATAACTTTTGGTTAAGCATTCTTTATCTTCTACTCTAACATCAGTTCTTTATTAACTTAGTGTGG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00448	121936	128593	-

Gene family

Gene family	subfamily
Transcription Factors Family	HB
EAR motif-containing Proteins	HB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000448s00026719.1	PF07526.6	POX	347	510	2.20E-36
Glyur000448s00026719.1	PF05920.6	Homeobox_KN	587	626	8.60E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.374
SRR1783600	control	0.399
SRR1783602	moderate drought stress	1.682
SRR1811619	moderate drought stress	1.663

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.296
DRR006520	Root Summer glycyrrhizin high producing strain	6.224
DRR006521	Root Winter glycyrrhizin high producing strain	1.773
DRR006522	Root Winter glycyrrhizin high producing strain	1.750
DRR006523	Root Summer glycyrrhizin low producing strain	9.956
DRR006524	Root Summer glycyrrhizin low producing strain	10.174
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.221
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.225

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.013
SRR2868004	Drought Stress (root)	0.038
SRR2967015	Control (root)	0.015

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.249
SRR9715740	Leaf	0.057
SRR9715741	Leaf	0.187
SRR9715739	Root	1.161
SRR9715742	Root	10.534
SRR9715743	Root	10.201

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.022
SRR8749028	MeJA induced 9h	0.048
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.815
SRR8400027	Control - Root	2.317