Gene detail information of Glyur000448s00026718 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN06862.1 | 1.59E-18 | hypothetical protein glysoja_037606 [Glycine soja] |
| trEMBL | tr|K7LVK0|K7LVK0_SOYBN | 6.00E-19 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G29971.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00448 | 116479 | 121406 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.731 |
| SRR1783600 | control | 28.273 |
| SRR1783602 | moderate drought stress | 37.845 |
| SRR1811619 | moderate drought stress | 36.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 283.929 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 282.187 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 70.614 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 64.923 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 130.038 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 129.262 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.429 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.498 |
| SRR2868004 | Drought Stress (root) | 44.591 |
| SRR2967015 | Control (root) | 29.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.236 |
| SRR9715740 | Leaf | 0.238 |
| SRR9715741 | Leaf | 0.024 |
| SRR9715739 | Root | 12.500 |
| SRR9715742 | Root | 77.704 |
| SRR9715743 | Root | 60.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.343 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.166 |
| SRR8749030 | Uninduced | 0.143 |
| SRR8749031 | Uninduced | 1.402 |
| SRR8749032 | Uninduced | 0.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.186 |
| SRR8400027 | Control - Root | 55.038 |