Gene detail information of Glyur000448s00026717.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08080.1 | 7.00E-86 | alpha carbonic anhydrase 7 |
| NR | XP_003541987.1 | 1.51E-160 | PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Glycine max] |
| COG | YP_006464143.1 | 2.00E-43 | carbonic anhydrase [Solibacillus silvestris StLB046] |
| Swissprot | tr|Q8L817|ATCA7_ARATH | 5.00E-114 | Alpha carbonic anhydrase 7 (Precursor) |
| trEMBL | tr|I1M4I7|I1M4I7_SOYBN | 6.00E-161 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G39920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00448 | 88129 | 90868 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01674 | cah | EC:4.2.1.1 | Nitrogen metabolism | map00910 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000448s00026717.1 | PF00194.16 | Carb_anhydrase | 41 | 265 | 1.30E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.482 |
| SRR1783600 | control | 19.011 |
| SRR1783602 | moderate drought stress | 36.998 |
| SRR1811619 | moderate drought stress | 37.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.674 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.721 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.370 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.844 |
| SRR2868004 | Drought Stress (root) | 1.820 |
| SRR2967015 | Control (root) | 2.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.563 |
| SRR9715740 | Leaf | 2.006 |
| SRR9715741 | Leaf | 0.811 |
| SRR9715739 | Root | 20.403 |
| SRR9715742 | Root | 13.941 |
| SRR9715743 | Root | 17.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.469 |
| SRR8749029 | MeJA induced 9h | 0.068 |
| SRR8749030 | Uninduced | 2.454 |
| SRR8749031 | Uninduced | 0.902 |
| SRR8749032 | Uninduced | 1.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 81.093 |
| SRR8400027 | Control - Root | 72.563 |