Gene detail information of Glyur000447s00016651 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G73177.1 | 5.00E-09 | bonsai |
| NR | XP_003626105.1 | 2.01E-33 | hypothetical protein MTR_7g111090 [Medicago truncatula] |
| trEMBL | tr|Q2HV02|Q2HV02_MEDTR | 7.00E-34 | Uncharacterized protein {ECO:0000313|EMBL:AFK47402.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00447 | 110745 | 112462 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.816 |
| SRR1783600 | control | 27.648 |
| SRR1783602 | moderate drought stress | 17.968 |
| SRR1811619 | moderate drought stress | 18.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 76.768 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 77.803 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.886 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.205 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 53.056 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 53.617 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 41.228 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 41.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 87.367 |
| SRR2868004 | Drought Stress (root) | 72.838 |
| SRR2967015 | Control (root) | 67.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.602 |
| SRR9715740 | Leaf | 30.834 |
| SRR9715741 | Leaf | 17.000 |
| SRR9715739 | Root | 29.889 |
| SRR9715742 | Root | 13.482 |
| SRR9715743 | Root | 19.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.612 |
| SRR8749028 | MeJA induced 9h | 26.605 |
| SRR8749029 | MeJA induced 9h | 35.564 |
| SRR8749030 | Uninduced | 17.800 |
| SRR8749031 | Uninduced | 12.053 |
| SRR8749032 | Uninduced | 15.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 68.152 |
| SRR8400027 | Control - Root | 66.044 |